Gene Sfum_2328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2328 
Symbol 
ID4459384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2861439 
End bp2862596 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content62% 
IMG OID639703093 
Producthypothetical protein 
Protein accessionYP_846444 
Protein GI116749757 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCG TATTCATTTC GCCGAACTTT CCTCCCACCT GGTTCAACTT CTGCACGGCC 
CTGCGGGAGG CGGGCGCAAC GGTTCTGGGA ATCGGGGATT CCCCTTACGA CGAGTTGCGC
CCGGAGCTTC GCGCCGCGCT GACCGAATAC TACCGGGTCC CGGCCATGGG CGATTACGAC
GCCATGCTCC GGGCCTGCGG ATTCTTCACG CACAGGTATG GAAAAATAGA CCGCATCGAG
TCGCATACCG AGTTCTGGCT GGGAATCGAC GCACGGCTGC GCGAGGATTT CAACGTTTTC
GGCCAGAAAC CGCATGACCT GGAAATCAAC CGCCGCAAGA CGGGGATGAA GCGAGGGTTC
ATCAAGGCGG GAATTCCTTG CGCCGACGGG GTCCTTGCCA CGGACGCGAC GGTCGTGCGC
AGGTTTGTGG CGGAACACGG CTATCCGGTC ATTTTCAAAC CGGACCAGGG CGTCGGCGCG
GCGGATACCT TCAAGGTCGC CGGCGACGAA CAGCTGGATG CCGTTCTGGG CAACCTGCCT
CCGGGGTACA TGGTCGAGAA GGCTCTGTCC GGCGATCTGC TCAGCTTCGA CGGCCTGACC
GCCCGCGACG GGTCCATCGT CTTCCGGACG GCCCATCACT TCTCCGCGGG CATCATGGAA
ACGGTGAACG AGCGGCGCCA CCTGCACTAC TATTCCCTGC GCGACATCCC CCCCGAGCTC
GAGAGACTGG GGAGAAAGAC CGTTGCCGCT TTCGACGTCC GGGAACGCTT TTTCCACATC
GAATTCTTCC GCCGGGACCC GTCGACCTAC CACGCCCTGG AAATCAATGT CCGTCCACCG
GGCGGCTTCT CCCTGGATAT GATGAACTAC GCCTGCGACA TCGACCTCTT CCGCTGGTGG
GCGGAGTCGG TCGTACACGA CCGGCGTGAT TTCTCTTTCG AGCGAAAATA CCACGCGGCG
CATGCCTCGC GACGGCATGG GGTCAACTAC CGGTTCGGCC ACGAACAGCT GCTCGCCGAA
ATCGGTCCGC TGGTGGTCAA CCACCTGGAA ATTCCGGACG CGCTCAGCGG CGCCATGGGC
AATTACGCGT ACCTGCTGCG ATCGCCCGAT CAAGGCGAGA TACTGGAGGC CATCGCCAAG
GTCGAGGCGA CGGCCTGA
 
Protein sequence
MNVVFISPNF PPTWFNFCTA LREAGATVLG IGDSPYDELR PELRAALTEY YRVPAMGDYD 
AMLRACGFFT HRYGKIDRIE SHTEFWLGID ARLREDFNVF GQKPHDLEIN RRKTGMKRGF
IKAGIPCADG VLATDATVVR RFVAEHGYPV IFKPDQGVGA ADTFKVAGDE QLDAVLGNLP
PGYMVEKALS GDLLSFDGLT ARDGSIVFRT AHHFSAGIME TVNERRHLHY YSLRDIPPEL
ERLGRKTVAA FDVRERFFHI EFFRRDPSTY HALEINVRPP GGFSLDMMNY ACDIDLFRWW
AESVVHDRRD FSFERKYHAA HASRRHGVNY RFGHEQLLAE IGPLVVNHLE IPDALSGAMG
NYAYLLRSPD QGEILEAIAK VEATA