| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1856 |
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| Symbol | |
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| ID | 5058315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2121668 |
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| End bp | 2125015 |
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| Gene Length | 3348 bp |
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| Protein Length | 1115 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640474126 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001158696 |
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| Protein GI | 145594399 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.977925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGC GGACCGACCT CAGACACGTC CTGGTGATCG GCTCCGGGCC GATCGTGATC
GGGCAGGCCT GCGAGTTCGA CTACTCCGGC ACCCAGGCGT GCCGGGTACT GCGCAGCGAG
GGGATCCGGG TCAGCCTGGT CAACTCGAAC CCAGCGACGA TCATGACGGA TCCGGAGTTC
GCCGACGCCA CGTACGTCGA GCCGATCACC CCGGAGTTCG TCGAACTGGT CATCGCCAAG
GAGCGGCCGG ACGCAGTGCT GCCCACCCTG GGTGGCCAGA CCGCGCTGAA CACGGCGGTC
GCGCTGCACG AGGCCGGGGT ACTGGAGAAG TACGGCGTCG AGTTGATCGG CGCGAACATC
GACGCGATCC GTCGCGGCGA GGACCGGCAG CTGTTCAAGG ACATCGTCGC CAAGGCGGGT
GTTCGGATCG GGGTCGAGGA TCCCGCGACG CTGGTGCCGC GTTCCCGGGT CTGCCACTCG
ATGGACGAGG TCCGCGAGAC CGTCGCGGAG CTGGGCCTGC CGGCGGTGAT CCGGCCGTCG
TTCACGATGG GTGGCCTCGG CTCCGGCATG GCCCACACCG ATGCGGACCT GGAACGCATC
GCCGGTGCCG GCCTGGCTGC CAGCCCGGTG CACGAGGTGC TCATCGAGGA GAGCGTGCTC
GGCTGGAAGG AGTACGAGCT CGAGCTGATG CGCGACCGGC ACGACAACGT CGTGGTGGTC
TGCTCGATCG AGAACGTCGA CCCGATGGGT GTGCACACCG GTGACAGTGT CACCGTGGCC
CCGGCGATGA CGCTCACCGA CCGGGAGTAT CAGCGTCTAC GGGACCTCGG CATCGCGGTG
CTGCGCGAGG TGGGGGTGGA CACCGGGGGC TGCAACATCC AGTTCGCGGT GAACCCGGAC
GACGGCCGGA TCGTCGTGAT CGAGATGAAC CCCCGGGTCT CCCGCTCGTC GGCGCTCGCC
TCGAAGGCGA CCGGCTTTCC GATCGCGAAG ATCGCCGCGA GGCTGGCCAT CGGCTACACC
CTCGACGAGA TCCCCAACGA CATCACCCTG AAGACGCCGG CCGCGTTCGA GCCGACGTTG
GACTACGTGG TGGTCAAGAT TCCGCGCTTC GCGTTCGAGA AGTTCCCCGG CGCCGACCCG
GAGCTGACCA CCACCATGAA GTCGGTCGGT GAGGCGATGA GCCTGGGCCG CAACTTCACC
GAGGCGCTGA ACAAGGCCAT GCGCTCGATG GAGACGAAGG CGGCCGGCTT CTGGACCACG
CCTGACCCGG CCGGTGCCAC CCGGGAGGGC ACGCTCGCGG CGCTGCGGAT GCCGCACGAC
GGGCGGCTCT ACACGGTGGA ACGGGCGCTG CGGCTCGGCG CCTCGATCGC CGAGGTGGCG
GCGGCCTCCG GCGGGATGGA CCCGTGGTTC CTCGACCAGA TCGCCGGCCT TGTGGAGCTG
CGGGCCGAGA TCGTTGACGC CCCGGTGCTC GACGTCGACC TGCTGCGCCG GGCCAAGCGG
GCGGGGCTCT CCGACCGGCA GCTCGCCGCG TTGCGCCCCG AGCTGGCCGC CGAGGACGGT
GTTCGGACGC TGCGGCACCG GTTGGGCGTC CAGCCGGTCT ACAAGACCGT GGACACCTGC
GCGGCGGAGT TCGAGGCGAC GACCCCCTAC CACTACTCCA CCTACGACGC GGAGACCGAG
GTGCTCGGGT CAGACCGGCC CAAGGTGCTG ATCCTCGGCT CGGGGCCGAA TCGGATCGGG
CAGGGAATCG AGTTCGACTA CTCCTGCGTG CACGCCGTCA TGGCGTTGCG GGACGTCGGA
TACGAGACGG TCATGGTCAA CTGCAATCCG GAGACCGTCT CCACCGACTA CGACACCGCC
AACCGGCTCT ACTTCGAGCC GCTGACCTTC GAGGACGTTC TCGAGGTGTG GCACGTCGAG
GACTCCTCCG GACGGGCGGC CGGTGGCCCC GGAGTGGTCG GGGTGGTCGT ACAGCTCGGT
GGTCAGACAC CGTTGGGGCT GGCACAGCGG CTCAAGGACG CCGGGGTGCC GGTCGTCGGC
ACCTCTCCGG AGTCGATTCA CCTCGCCGAG GAGCGGGGCG CGTTCGGTGC GCTGCTGGCC
CGCGCCGGGC TGCGGGCGCC GGCGCACGGC ACCGCCATCT CGTACGACGA GGCGAAGACG
ATCGCCGCCG AGATCGGCTA CCCGGTGCTG GTCCGTCCCT CGTACGTGCT CGGTGGACGG
GGCATGGAGA TTGTCTACGA CGACGCCACA CTGCGCGACT ACATTGGCCG GGCCACCGAC
ATCTCCCCGG ATCATCCGGT GCTGGTGGAC CGGTTCCTCG ATGACGCCAT CGAGATCGAC
GTGGACGCGC TCTGTGACGC CGCCGGTGAG GTCTATCTCG GTGGTGTGAT GGAGCACATC
GAGGAGGCTG GTATCCACTC CGGTGACTCC TCCTGCGCGT TGCCGCCGAT CACCCTGGCC
GGTTCCCACG TCGCCGAGGT CCGCCGGTAC ACCGAGGAGA TCGCCCGGGG CATCGGGGTG
CAGGGTCTGC TCAACGTGCA GTACGCCCTC AAGGACGACC AGCTGTGGGT ACTCGAGGCC
AACCCGCGTG CGTCCCGGAC CGTACCGTTT GTCTCCAAGG CCACTGCGGT GCCGCTGGCC
AAGGCGGCGG CTCGGATCGC GCTCGGTGCC ACCATCGCCG AGCTGCGCGC CGAGGGCCTG
CTCCCGGCCG ACGGCGACGG TGGCACCCTC CCGGCGGATG CGCCGATCGC GGTCAAGGAG
GCGGTGCTCC CGTTCAAGCG GTTCCGCACC CCGGCCGGGA AGGGGATCGA CTCGCTACTC
GGGCCGGAGA TGAAGTCCAC CGGCGAGGTG ATGGGGATTG ACACGGCCTT CGGGTACGCC
TTCGCCAAGT CGCAGTCGGC CACGTACGGC TCACTGCCGA CCGGCGGGAA GATCTTCGTC
TCGGTCGCCA ACCGGGACAA GCGTGGCATG ATCTTCCCGA TCAAGCGCCT GGCCGACCTG
GGCTTCGAGA TCATCGCCAC CACGGGCACT GCCGAGGTGC TGCGCCGGCA CGGCATCGGC
TGCGAGCAGA TCCGCAAGCA CTACGAGTCG GGGGAGAGCG AGGACGCGGT CTCGCTGATC
CGCTCCGGCG AGGTGGCGCT CGTGGTGAAC ACCCCGCAGG GTTCCGGAGC GAGCGCCCGC
TCGGATGGCT ACGAGATCCG TAGTGCCGCC GTGACGGCGG ACATCCCCTG CATCACGACC
GTTCCCGGCG CCGCCGCCGT GGTGATGGCG GTCGAGGCCC GGATCCGTGG TGACATGCGG
GTCCGTCCCC TGCAGGCGCT GCACGCCTCG CTGCGGAGCG CTCGGTGA
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| Protein sequence | MPKRTDLRHV LVIGSGPIVI GQACEFDYSG TQACRVLRSE GIRVSLVNSN PATIMTDPEF
ADATYVEPIT PEFVELVIAK ERPDAVLPTL GGQTALNTAV ALHEAGVLEK YGVELIGANI
DAIRRGEDRQ LFKDIVAKAG VRIGVEDPAT LVPRSRVCHS MDEVRETVAE LGLPAVIRPS
FTMGGLGSGM AHTDADLERI AGAGLAASPV HEVLIEESVL GWKEYELELM RDRHDNVVVV
CSIENVDPMG VHTGDSVTVA PAMTLTDREY QRLRDLGIAV LREVGVDTGG CNIQFAVNPD
DGRIVVIEMN PRVSRSSALA SKATGFPIAK IAARLAIGYT LDEIPNDITL KTPAAFEPTL
DYVVVKIPRF AFEKFPGADP ELTTTMKSVG EAMSLGRNFT EALNKAMRSM ETKAAGFWTT
PDPAGATREG TLAALRMPHD GRLYTVERAL RLGASIAEVA AASGGMDPWF LDQIAGLVEL
RAEIVDAPVL DVDLLRRAKR AGLSDRQLAA LRPELAAEDG VRTLRHRLGV QPVYKTVDTC
AAEFEATTPY HYSTYDAETE VLGSDRPKVL ILGSGPNRIG QGIEFDYSCV HAVMALRDVG
YETVMVNCNP ETVSTDYDTA NRLYFEPLTF EDVLEVWHVE DSSGRAAGGP GVVGVVVQLG
GQTPLGLAQR LKDAGVPVVG TSPESIHLAE ERGAFGALLA RAGLRAPAHG TAISYDEAKT
IAAEIGYPVL VRPSYVLGGR GMEIVYDDAT LRDYIGRATD ISPDHPVLVD RFLDDAIEID
VDALCDAAGE VYLGGVMEHI EEAGIHSGDS SCALPPITLA GSHVAEVRRY TEEIARGIGV
QGLLNVQYAL KDDQLWVLEA NPRASRTVPF VSKATAVPLA KAAARIALGA TIAELRAEGL
LPADGDGGTL PADAPIAVKE AVLPFKRFRT PAGKGIDSLL GPEMKSTGEV MGIDTAFGYA
FAKSQSATYG SLPTGGKIFV SVANRDKRGM IFPIKRLADL GFEIIATTGT AEVLRRHGIG
CEQIRKHYES GESEDAVSLI RSGEVALVVN TPQGSGASAR SDGYEIRSAA VTADIPCITT
VPGAAAVVMA VEARIRGDMR VRPLQALHAS LRSAR
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