| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_4057 |
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| Symbol | |
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| ID | 5211040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 5078275 |
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| End bp | 5081616 |
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| Gene Length | 3342 bp |
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| Protein Length | 1113 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640597645 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001278351 |
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| Protein GI | 148658146 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGAC GAACTGATAT TCATACCATT CTGATCATTG GCTCCGGTCC CATCGTCATC
GGTCAGGCAT GCGAGTTCGA TTACTCGGGT GTTCAGGCAT GCAAAGTGCT ACGCCGCGAG
GGGTTCCGCG TTGTGCTCGT CAATTCCAAC CCGGCGACGA TCATGACCGA TCCACAGATG
GCGGATGCCA CCTACATCGA ACCACTCACC CCGGAGATCG TCGAAAAAAT TATCGAACGC
GAGAAACCGG ATGCCCTGCT GCCGACGGTT GGCGGGCAGA CCGGTCTCAA CCTGGCGATG
AAACTGGCGG AGAGCGGGGT GCTTGACCGG TACGGCGTTC AGTTGATCGG CGCTTCTCCC
AGAGCCATCG CCCTTGCCGA GGATCGCGAA CTGTTCAAGC GCGCCATGAT CAACGCCGGG
TTGCGCGTGC CGCTGGGCGA AACGGTCTCG ACCGTCGATC AGGCGCTAGA CGTGGCAGCG
CGGATCGGGT ACCCGGTGCT GGTGCGCCCT TCGTTCACCC TCGGCGGCAG CGGCGGCGGC
GTGGCGTACA ATGAGGCGCA ACTGCGCGAG ATTGCGGATC GCGGCTTGCG CGCCTCACCG
GTCACCCAGG TGCTCATCGA ACAATCGGTG CTTGGTTGGA AGGAGTACGA ACTTGAAGTG
ATGCGCGACC GGGCGGACAA TTTCGTCGTG GTCTGTTCGA TTGAAAACCT CGACCCGATG
GGCGTCCACA CCGGCGACTC GATCACCATC GCTCCCGCCA TGACCCTTAC CGACCGCGAG
TATCAGCGGT TGCGCGAAAT GGCGAAGATC ATCATCCGCA CCGTGGGCGT TGAAACCGGC
GGATCGAATA TTCAGTTCGC TGTCAATCCG CGTGACGGCA CACCGCTGGT GATTGAGATG
AATCCGCGCG TCAGCCGCTC ATCGGCGCTG GCGTCCAAAG CCACGGGTTT CCCCATCGCC
AAGATCGCCG CGCTGCTCGC CGTCGGCTAT ACGCTCGACG AGATCCCCAA CGACATTACC
AGAGTGACCC CCGCCTCATT CGAACCAAGC CTGGATTATG TCGTCGTTAA GATCCCCCGC
TGGGCATTCG AGAAGTTTCC CGGCGTCGAT CCAACCCTGG GACCGCAGAT GAAGAGCGTC
GGCGAGGTGA TGGCGATCGG TGCAACGTTC AACGAGGCAT TGCAGAAGGC GATCCGCGGA
TTGGAGATCG GCGCTGTGGG GTTTGGCGCG TTTGCCGGAA GGCGCCTGAA TACGCAGGAA
CAACGCGAGC CATCGGACGA TGACCTGCGC ATTCCGACGG CGCAACGCAT CTTCCACGTC
GCCGATGCCC TGCGCGCTGG CTGGGACATC GAACGGATCG CTGCGCTGAC CGGCTACGAT
CCGTGGTTTG TTGCGCAAAT GCGAGCAATT ATCGATCTTG AAGCGGCGCT GGCGCGTCAT
TCGCTCGATA CGCTCCCTGC TGACCTGCTG CGCGAAGCGA AGGAACACGG CTTCTCCGAC
GCGCAGATCG CGCTCATCCT TCAGCCCGCT GCGCGCGATG CCGCACCCCA CTATCCAACC
GAAATGGACG TGCGCGCTCG CCGCAAAGCC CTCGGCATTC TGCCGGTCTA CCATCGTATC
GATACCTGCG CCGCCGAGTT CGAAGCCTAC ACCCCCTACC TCTACAGTAC CTATGCGACT
GCTGACGAAT CGGCGGTGAC CGACCGCCCC AAAGCGATCA TTCTTGGCGG CGGACCGAAC
CGCATCGGGC AGGGGATCGA GTTCGACTAT TGCTGCGTCC ATGCCAGTTT TGCGCTGCGC
GACCTCGGTT ATGAGACGAT CATGATCAAC TGCAACCCGG AGACCGTCTC GACCGACTAC
GATACCAGCG ACCGCCTCTA TTTCGAGCCG TTGACCCTGG AAGACGTGCT GAACGTCTGG
GAGAACGAGT CGGGAAGGAG AGGCGACGGC GAAGAAACAC CAGTGCCGAT GCTGGTTCAG
TTCGGCGGTC AGACGCCGCT CAACCTGGCG AAGGGACTCA CAGCTGCCGG TGTGCCGATC
TGGGGCACCT CTCAGGACTC AATCGACCTG GCGGAGGATC GCGGTCGCTT CAGTGAACTG
TTGCGTCGGC TCGACATTAT GCAACCGGAG AGCGGCATGG CTGCCGACCT CCAGGCGGCG
CGCAAGGTGG CGCAGCGGAT CGGATACCCC GTGCTGGTGC GCCCCAGTTA TGTGCTCGGC
GGGCGGGCGA TGGCAATTGC CTATGATGAT GAAGGGCTGG CGCAGTACAT CCAGGAAGCG
ACCCGGATCA GTGCCGGGCA GCCGGTTCTG ATCGACCGTT ATCTGGAAGA CGCCTTCGAA
CTGGATGTCG ATGCCGTCGG CGATGGCGAG CGCGTGGTGA TCGGCGGCAT CATGGAGCAC
GTTGAGGAAG CAGGGGTTCA TTCCGGCGAC TCGGCGATGG TTATGCCGCC CTACAAGGTG
AGCGCCTATC ATCTTGCCAT CATCCGCGAT GAGACGATCC GGATTGGTGA GGCGCTGCGC
GTGAAAGGGT TGATGAATAT CCAGTTCGCC ATCAAAGACG ATGAGGTCTA CGTTCTTGAA
GTCAACCCGC GCGCTTCACG CACCGTTCCG TTCGTCGCCA AAGCCTCCGG CGTCCCGCTT
GCGCGCATCG CGGCGCAGGC GGCAGCCGGG AAGAAACTGA GCGAACTGGG ATTCACAAAG
GAACCGCCGC TCAACGGCTT CTTCGTCAAA GAAGCGGTGC TGCCGTTCGA CAAGTTCCCT
GGCGCGGCGG TCTTTCTCAG CCCCGAAATG CGCTCCACCG GCGAGGTGAT GGGGCATGCC
TCGACATTCG GGCACGCTTT CGCCAAAGCC GAAATGGGCG CCAACCAGCG CATTCCCACC
AGCGGCGGGG CGCTGCTGAC GGTCAACGAC TACGACAAGG GCGCCATTGG GCGTATCGCG
CGCGACCTGG TGAAACTCGG CTTTACGATT TACGCTACCC GCGGCACCGC CAGCTGGCTG
CATCAACTCG GATTGCCGGC GATTGTCGTC AACAAAGTGT CCGAAGGCTC ACCCCATACC
GTCGATCTGA TCGCATCGGG CAAGGTGGGG CTGGTGATCA GCACGCCGCT CGGATCGCGC
GCTTACGCCG ACGGTCAGGC GCTGCGATCG GCAGCCATCC GCTACGGCGT TATGCTCGTC
ACAACCCTCA CCGGCGCAGC GGCGACCATC AGCGCCATCA AAGCGCTGCG CCAGAAGGAA
TTGCGCGTCC GCTCATTGCA AGATCACTAC CGCATGACAC GGACATCGGC ACAGAACATA
CCCACCGGTC TATCTGCAAC TGATAATGAG GGCGTATTAT GA
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| Protein sequence | MPRRTDIHTI LIIGSGPIVI GQACEFDYSG VQACKVLRRE GFRVVLVNSN PATIMTDPQM
ADATYIEPLT PEIVEKIIER EKPDALLPTV GGQTGLNLAM KLAESGVLDR YGVQLIGASP
RAIALAEDRE LFKRAMINAG LRVPLGETVS TVDQALDVAA RIGYPVLVRP SFTLGGSGGG
VAYNEAQLRE IADRGLRASP VTQVLIEQSV LGWKEYELEV MRDRADNFVV VCSIENLDPM
GVHTGDSITI APAMTLTDRE YQRLREMAKI IIRTVGVETG GSNIQFAVNP RDGTPLVIEM
NPRVSRSSAL ASKATGFPIA KIAALLAVGY TLDEIPNDIT RVTPASFEPS LDYVVVKIPR
WAFEKFPGVD PTLGPQMKSV GEVMAIGATF NEALQKAIRG LEIGAVGFGA FAGRRLNTQE
QREPSDDDLR IPTAQRIFHV ADALRAGWDI ERIAALTGYD PWFVAQMRAI IDLEAALARH
SLDTLPADLL REAKEHGFSD AQIALILQPA ARDAAPHYPT EMDVRARRKA LGILPVYHRI
DTCAAEFEAY TPYLYSTYAT ADESAVTDRP KAIILGGGPN RIGQGIEFDY CCVHASFALR
DLGYETIMIN CNPETVSTDY DTSDRLYFEP LTLEDVLNVW ENESGRRGDG EETPVPMLVQ
FGGQTPLNLA KGLTAAGVPI WGTSQDSIDL AEDRGRFSEL LRRLDIMQPE SGMAADLQAA
RKVAQRIGYP VLVRPSYVLG GRAMAIAYDD EGLAQYIQEA TRISAGQPVL IDRYLEDAFE
LDVDAVGDGE RVVIGGIMEH VEEAGVHSGD SAMVMPPYKV SAYHLAIIRD ETIRIGEALR
VKGLMNIQFA IKDDEVYVLE VNPRASRTVP FVAKASGVPL ARIAAQAAAG KKLSELGFTK
EPPLNGFFVK EAVLPFDKFP GAAVFLSPEM RSTGEVMGHA STFGHAFAKA EMGANQRIPT
SGGALLTVND YDKGAIGRIA RDLVKLGFTI YATRGTASWL HQLGLPAIVV NKVSEGSPHT
VDLIASGKVG LVISTPLGSR AYADGQALRS AAIRYGVMLV TTLTGAAATI SAIKALRQKE
LRVRSLQDHY RMTRTSAQNI PTGLSATDNE GVL
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