Gene ECH_0378 details

Gene Information

• Locus tag: ECH_0378
• Symbol: carB
• ID: 3926971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia chaffeensis str. Arkansas
• Kingdom: Bacteria
• Replicon accession: NC_007799
• Strand: -
• Start bp: 369666
• End bp: 372896
• Gene Length: 3231 bp
• Protein Length: 1076 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637901502
• Product: carbamoyl phosphate synthase large subunit
• Protein accession: YP_507198
• Protein GI: 88658245
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit; [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.546328
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAAC GTACAGACAT AGAATCAATA TTAGTTATTG GAGCAGGTCC TATAGTTATA 
GGACAAGCAT GTGAATTTGA TTATTCAGGT ACACAAGCTT GTAAAGTTTT AAAACAAGAA 
GGATATCGAA TTATCCTCAT TAACTCAAAC CCTGCAACAA TAATGACTGA TCCCGAAATT 
GCTGATTCAA CATACATTGA ACCAATTACA TCAAACATTA TTGAAAAAAT CATTATAAAA 
GAAAGACCAA GCGCAATACT ACCAACAGTA GGTGGGCAAA CTGCTCTAAA CGCTGCAATC 
AACCTATGTG AGTTAGGAAT CTTAGAAAAA TATAACGTAA AACTAATAGG TGCAACAAAA 
GAAGCAATTA AAAAAGCTGA AGATAGGAAT CTATTCCGAC AAGCAATGGA CAAAATAGGA 
GTAAAATATC CAAAAAGTAT AATAATAAGA AGTGTTGATG AAATAAATGA CGCATTAGAA 
TACATAGGAT TACCAGCAAT AATTAGGCCA TCATTTACTC TTGGTGGCAT AGGGGGTGGT 
ATATCCTATA ATAAAGAAGA GTTTCATAAA AATGTAAGCC ATGGTTTAAA CATTTCCCCA 
ATATCTGAGG TACAAGTAGA TGAATCCATC ATCGGGTGGA AAGAATTTGA AATGGAAGTT 
ATGCGAGATA ATAAAGATAA CTGCATTGTA GTTTGTTCTA TAGAAAATCT CGATCCAATG 
GGAGTACACA CTGGAGATAG TATAACAGTA GCACCTGCAT TGACTTTAAG AGATGTAGAA 
TATCAAAAAA TGCGAGACAT ATCATTTTCT ATACTTAGAG AAATAGGAGT AGATACTGGT 
GGATCAAACG TACAGTTTGC AGTAAACCCA AAAAATGACA ATGATTTACT CGTTATAGAG 
ATGAACCCAA GAGTCTCTAG ATCATCAGCA CTAGCATCAA AAGCAACAGG TTATCCTATA 
GCTAAGGTTG CCGCAAAATT AGCTATTGGT TATTCTCTAG ATGAGATACA AAATGACTGT 
ACAGAAGTCA TTCCAGCATC ATTTGAACCA AGCATAGATT ACATTGTTAC AAAAATTCCA 
CGATTCAATT TTGATAAGTT CCGAGGTACA GAAAAAGAAC TGTCAACCTC CATGAAATCT 
GTAGGAGAAG TAATGGCAAT TGGAAGATCT TTTCCAGAAT CATTACAAAA AGCACTGTGT 
TCCTTAGAAG CTGGATATTC TGGATTAAAC GAGTATTTCG ACCAAAACAT AGAAATAGAC 
CAACTATATA ACTCCCTTGT AAAATTATCT CCAGATAGAA TATTTATAAT TGCAGATGCT 
TTACGACACA ATATTAGCAT AGAAGAAATC AATAAAATTA CTGGGTACGA TCCTTGGTTT 
TTAACCCAAA TCAAAAATAT TATACAATGT GAACAACAAA TACAGAAAAA TGGATTACCA 
AAAGAAGCAG AAGGGTTGTT ATTACTAAAG AAAATGGGGT TTTCTGATAT AAGGTTAGCA 
TATTTAAGCA AGACTACAGT AGAATATATA GAAGATCTGA GGAAATCTTT ATCCATAAAA 
CCTGTATATA AACATATAGA TACTTGTGCA GGAGAATTTA AAACCAATGC ATCATATATG 
TATAGTTGCT ATGAAGGTAA TACTATCAAT GTCACTGAAT GTGAGTCTGT TGTAACAAAT 
AACAAAAAAG TGATAATTTT AGGCAGTGGT CCTAACCGTA TTGGTCAAGG TATAGAATTT 
GATTATACAT GTGTACATGC AGCACATACC ATAAGACAAA TGGGGTATGA GTCTATTATG 
ATAAATTGTA ATCCGGAAAC CGTTTCAACT GATTACGACA TTTCAGATAA ATTATATTTT 
TCTCCTCTAA CACGAGAAAG TGTTCTAGAC ATCATATATA AAGAACAAGA GACAAACTCT 
TTATTAGGAG TAATAGTACA ATTTGGTGGA CAAACACCTT TAAAGCTTGC AAAAGTATTA 
CAAGAGAAAA ACATTAATAT TCTTGGAACA TCCTTTGATT CCATAGATTT AGCTGAAGAT 
CGCATGAAAT TTCAACAATT GCTTACACAA TTAAATTTAA AGCAACCTTC TAATATCACT 
TGCAATTCAA TACATGAAGT ATATGAATGC ATCAAAGATT TAGTATTCCC TATACTAGCA 
AGACCATCGT ACGTACTAGG TGGACAATCA ATGTCAATTA TTCGTGATAG TAATGCTTTA 
TCAAATTACT TAACTACTTA TAAGAACATA TTCGATCATG GATCATTATT GTTAGATCAA 
TTTTTAACTC ATGCAATTGA AGTAGATGTA GACGCTATCT GTGATGGAGA AAAGGTATAT 
ATAGCAGGGA TAATGGAGCA CATAGAAGAA GCTGGTGTAC ACTCAGGAGA TTCTGCATGT 
TCTTTACCTT CATATAGTTT AACCTCAGAA ATAACAGATG CTATAGCAGA GCAGACAAAA 
AAAATAGCAC TTGCACTACA AGTCAGAGGA TTTATTAATA TACAATATGC AATACAAGAT 
GGCGAAATAT ACATATTAGA AGTTAACCCT AGAGCTAGCA GAACTGTACC TTTTATTGCA 
AAAGCTACAG GTATCCCTAT AGCAAAAATT GCAACAGAAG TATTACTAGG TAAAAAACTT 
CCTAACGCTC TTGAAGAGAA ACTCACACAT GTAGCTGTAA AGGAAGCAGT ATTTTCTTTC 
TCAAGATTTC CAAACATAGA TGTTTTATTA GGACCTGAAA TGAAGTCTAC AGGAGAAGTA 
ATGGGAATCG ATAAATCATT TGAAATAGCA TTCGCAAAAG CACAAATGGC TGCTGGTTAC 
GAATTACCAA CTAAAGGTAC AGCCTTTATA TCTGTTAAAA ATTCAGATAA ACCACTCATT 
GTGAAAACAG CACAAATATT AAAAGATATC GGTTTTACTA TATTCTCGAC TAAAGGCACA 
TCCACTTATT TAAATGAAGC AGGTATTACT ACAGAACATG TAAATAAAGT AAGAGAAGGT 
AGACCACATA TATTAGACTT ATTACAAGAT GATAAAATAA ATCTAGTAAT TAATACTTCA 
GAAGGTATCA AGTCCTTTTC AGAAAGTAGT AGCATAAGAA AAACTGCACT GATAAAAAAA 
ATTCCATATA GTACCACAAT ACCTGGTGCA AGAGCTTTAG CACTTGCAAT AAAAACATTA 
AAAAAGCAAG GTATTCACGT AGAATCTATG CAGGAATACA CAAAAAAATA A 

 

Protein sequence

MPKRTDIESI LVIGAGPIVI GQACEFDYSG TQACKVLKQE GYRIILINSN PATIMTDPEI 
ADSTYIEPIT SNIIEKIIIK ERPSAILPTV GGQTALNAAI NLCELGILEK YNVKLIGATK 
EAIKKAEDRN LFRQAMDKIG VKYPKSIIIR SVDEINDALE YIGLPAIIRP SFTLGGIGGG 
ISYNKEEFHK NVSHGLNISP ISEVQVDESI IGWKEFEMEV MRDNKDNCIV VCSIENLDPM 
GVHTGDSITV APALTLRDVE YQKMRDISFS ILREIGVDTG GSNVQFAVNP KNDNDLLVIE 
MNPRVSRSSA LASKATGYPI AKVAAKLAIG YSLDEIQNDC TEVIPASFEP SIDYIVTKIP 
RFNFDKFRGT EKELSTSMKS VGEVMAIGRS FPESLQKALC SLEAGYSGLN EYFDQNIEID 
QLYNSLVKLS PDRIFIIADA LRHNISIEEI NKITGYDPWF LTQIKNIIQC EQQIQKNGLP 
KEAEGLLLLK KMGFSDIRLA YLSKTTVEYI EDLRKSLSIK PVYKHIDTCA GEFKTNASYM 
YSCYEGNTIN VTECESVVTN NKKVIILGSG PNRIGQGIEF DYTCVHAAHT IRQMGYESIM 
INCNPETVST DYDISDKLYF SPLTRESVLD IIYKEQETNS LLGVIVQFGG QTPLKLAKVL 
QEKNINILGT SFDSIDLAED RMKFQQLLTQ LNLKQPSNIT CNSIHEVYEC IKDLVFPILA 
RPSYVLGGQS MSIIRDSNAL SNYLTTYKNI FDHGSLLLDQ FLTHAIEVDV DAICDGEKVY 
IAGIMEHIEE AGVHSGDSAC SLPSYSLTSE ITDAIAEQTK KIALALQVRG FINIQYAIQD 
GEIYILEVNP RASRTVPFIA KATGIPIAKI ATEVLLGKKL PNALEEKLTH VAVKEAVFSF 
SRFPNIDVLL GPEMKSTGEV MGIDKSFEIA FAKAQMAAGY ELPTKGTAFI SVKNSDKPLI 
VKTAQILKDI GFTIFSTKGT STYLNEAGIT TEHVNKVREG RPHILDLLQD DKINLVINTS 
EGIKSFSESS SIRKTALIKK IPYSTTIPGA RALALAIKTL KKQGIHVESM QEYTKK