Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_2408 |
Symbol | carB |
ID | 4878126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 2515013 |
End bp | 2518351 |
Gene Length | 3339 bp |
Protein Length | 1112 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640139707 |
Product | carbamoyl phosphate synthase large subunit |
Protein accession | YP_001070683 |
Protein GI | 126434992 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.415819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGTC GGACAGACCT GCGCCACGTC CTGGTGATCG GCTCCGGGCC GATCCTGATC GGACAGGCCG CCGAATTCGA CTACTCCGGG ACCCAGGCCT GCCGCGTGCT GCGCGCCGAA GGCCTCACGG TCACACTGAT CAACTCCAAC CCGGCGACGA TCATGACCGA CCCGGAGTAC GCCGACTACA CCTACGTCGA ACCCATCACC CCGGACTTCG TCGAACGGGT GATCGCCCAG CAGGCCGAAC GCGGTAACAA GATCGATGCG CTGCTGGCCA CCCTCGGCGG GCAGACCGCG CTCAACACCG CGGTCGCGCT GTCGGAGAAC GGAGTGCTCG AACGCTACGA CGTCGAGTTG ATCGGCGCCG ACTTCGACGC GATCCAGCGT GGCGAGGACC GGCAGCGGTT CAAGGACATC GTCACCAAAG TGGGTGGGGA GTCAGCGAAG TCGAGAGTCT GTTTCACGAT GGAGGAGGTC CGCGAGACCG TCGGGGAACT GGGCTTGCCC GTCGTCGTGC GGCCGTCGTT CACGATGGGC GGTCTGGGCT CCGGCATGGC GTACTCGGCC GAGGACGTCG AGCGGATGGC GGGCCACGGC CTGGCCTCGT CGCCGAGCGC CAATGTGCTG ATCGAGGAAT CGATCTTCGG CTGGAAGGAA TACGAACTCG AGTTGATGCG CGACCGCCAC GACAACGTGG TGGTGGTGTG CTCGATCGAG AACTTCGACC CGATGGGCGT GCACACCGGC GATTCGGTGA CCGTCGCCCC GGCGATGACG CTGACCGACC GCGAATACCA GACCATGCGC GACCTCGGCA TCGCGATCCT GCGGGAGGTC GGTGTCGCGA CCGGCGGATG CAACATCCAG TTCGCGGTGA ACCCGAAAGA CGGCCGGCTC ATCGTCATCG AGATGAACCC GCGGGTGTCG CGGTCGAGTG CGCTGGCGTC GAAGGCCACC GGCTTCCCGA TCGCCAAGAT CGCGGCGAAG CTGGCGATCG GCTACACCCT CGACGAGATC CTCAACGACA TCACCAAGGA GACCCCGGCC TGCTTCGAGC CGACGCTGGA CTACGTCGTG GTCAAGGCGC CGCGGTTCGC GTTCGAGAAG TTCCCCGGCG CCGACGCCAC CCTGACCACG ACGATGAAAT CGGTCGGCGA GGCGATGTCG TTGGGCCGCA ACTTCATCGA GGCGCTCGGC AAGGTGATGC GTTCTCTGGA GACCGGCCGT GCCGGCTTCT GGACCGCACC GGACCCGATC GCCACCGTCG ACGAGGTGCT GGAGAACCTG CGCACCCCGA CCGATGGGCG GCTCTACGAC ATCGAGTTCG CGCTGCGGCT CGGGGCGTCG GTCGAGCAGG TCGCGGAGGC CTCCGGTGTC GACCCGTGGT TCGTCGACCA GATCGCCGGG CTGGTGGCGC TGCGCACCGA ACTCCTCGAC GCCCCGGTCC TCGACGGCAC GCTGCTGCGC CGGGCCAAGA ACAGCGGGCT GTCCGACCGC CAGATCGCCG CGCTGCGCCC GGAACTCGCC GGCGAGGTCG GGGTGCGGGC ACTGCGTCAG CGCCTGGGCA TCCACCCGGT GTTCAAGACC GTCGACACCT GCGCCGCGGA GTTCGAGGCC AAGACGCCCT ACCACTACAG CAGCTACGAA CTCGACCCCG CGGCCGAGTC GGAGGTGGCG CCGCAGGCCG AGCGGCCCAA GGTGCTGATT CTCGGCTCCG GGCCCAACCG GATCGGGCAG GGCATCGAAT TCGACTACAG CTGTGTGCAT GCCGCGACCA CGCTGAGCGA GGCCGGGTTC GAGACGGTGA TGATCAACTG CAACCCGGAG ACGGTCTCCA CCGACTACGA CACCGCCGAC CGGTTGTACT TCGAGCCGTT GACCTTCGAG GACGTCCTCG AGATCTACTA CGCCGAATCA GCCTCCGGCG CAGGCGGACC CGGCGTGGCC GGGGTGATCG TGCAACTCGG CGGCCAGACG CCGCTGGGCC TGGCCGAACG GCTCGAGCAG GCCGGTGTCC CGATCGTCGG CACCAGCCCC AAGGCCATCG ACCTGGCCGA GGACCGCGGC GCATTCGGTG AGGTGCTGCG CACCGCCGGG CTGCCCGCAC CGCGTTTCGG CCTGGCCACC ACGTTCGACC AGGCCCGCCG CATCGCCGCC GACATCGGCT ACCCCGTGCT GGTGCGGCCG TCCTACGTGC TGGGCGGCCG GGGTATGGAG ATCGTCTACG ACGAGCAGAC CCTGGAGGGT TACATCACCC GGGCCACCCA GCTCTCACCG GAACACCCGG TGCTGGTCGA CCGGTTCCTC GAGGATGCGA TCGAGATCGA CGTCGACGCC CTCTGCGACG GCACCGAGGT CTACATCGGG GGCATCATGG AGCACATCGA GGAGGCCGGC ATCCACTCCG GCGACTCGGC GTGTGCGCTG CCCCCGGTGA CGTTGGGCCG CAGCGACATC GAGTCGGTGC GGCGCGCGAC CGAGGCGATC GCCCACGGCG TCGGCGTGGT CGGGCTGCTC AACGTGCAGT ACGCGCTCAA GGACGACGTG CTCTACGTCC TGGAGGCCAA CCCGCGGGCC AGCCGCACGG TGCCGTTCGT ATCCAAAGCC ACGGCAGTGC CACTCGCCAA GGCGTGCGCG CGGATCATGC TCGGCGCCAG CATCGCCCAG TTGCGCGAGG AGGGCGTCCT GGCCGCGACC GGCGACGGTG CGACCACTGC GCGCAATGCG CCCGTCGCGG TGAAGGAAGC GGTGCTGCCG TTCCACCGGT TCCGCAAGGC CGACGGCGCC CAGATCGATT CGCTGCTCGG CCCGGAGATG AAGTCGACCG GTGAGGTGAT GGGCATCGAC CACGACTTCG GCAGCGCGTT CGCCAAGAGC CAGACCGCGG CCTACGGTTC GCTGCCGTCG GAGGGCACCG TGTTCGTGTC GGTGGCCAAC CGCGACAAGC GGTCGCTGGT CTTCCCGGTC AAACGGCTCG CCGACCTCGG GTTCAAGGTG CTCGCCACCG AGGGCACCGC GGAGATGCTG CGCCGCAACG GGATTCCGTG CGACGAGGTG CGCAAGCATT TCGAGGAACC GGGTGCTGGC AGGCCCGCGC GTTCGGCCGT CGAGGCCATC CGCGCCGGTG ATGTCGCGAT GGTGATCAAC ACGCCCTACG GCAACTCCGG TCCGCGCATC GACGGGTACG AGATCCGGTC GGCCGCGGTG TCGATGAACA TCCCGTGCAT CACCACCGTG CAGGGCGCGT CGGCGGCCGT GCAGGGCATC GAAGCCAGCC TGCGCGGCGA CATCGGGGTG ATGAGCCTGC AGGAGTTGCA CAGCGAGCTG GGAAACTGA
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Protein sequence | MPRRTDLRHV LVIGSGPILI GQAAEFDYSG TQACRVLRAE GLTVTLINSN PATIMTDPEY ADYTYVEPIT PDFVERVIAQ QAERGNKIDA LLATLGGQTA LNTAVALSEN GVLERYDVEL IGADFDAIQR GEDRQRFKDI VTKVGGESAK SRVCFTMEEV RETVGELGLP VVVRPSFTMG GLGSGMAYSA EDVERMAGHG LASSPSANVL IEESIFGWKE YELELMRDRH DNVVVVCSIE NFDPMGVHTG DSVTVAPAMT LTDREYQTMR DLGIAILREV GVATGGCNIQ FAVNPKDGRL IVIEMNPRVS RSSALASKAT GFPIAKIAAK LAIGYTLDEI LNDITKETPA CFEPTLDYVV VKAPRFAFEK FPGADATLTT TMKSVGEAMS LGRNFIEALG KVMRSLETGR AGFWTAPDPI ATVDEVLENL RTPTDGRLYD IEFALRLGAS VEQVAEASGV DPWFVDQIAG LVALRTELLD APVLDGTLLR RAKNSGLSDR QIAALRPELA GEVGVRALRQ RLGIHPVFKT VDTCAAEFEA KTPYHYSSYE LDPAAESEVA PQAERPKVLI LGSGPNRIGQ GIEFDYSCVH AATTLSEAGF ETVMINCNPE TVSTDYDTAD RLYFEPLTFE DVLEIYYAES ASGAGGPGVA GVIVQLGGQT PLGLAERLEQ AGVPIVGTSP KAIDLAEDRG AFGEVLRTAG LPAPRFGLAT TFDQARRIAA DIGYPVLVRP SYVLGGRGME IVYDEQTLEG YITRATQLSP EHPVLVDRFL EDAIEIDVDA LCDGTEVYIG GIMEHIEEAG IHSGDSACAL PPVTLGRSDI ESVRRATEAI AHGVGVVGLL NVQYALKDDV LYVLEANPRA SRTVPFVSKA TAVPLAKACA RIMLGASIAQ LREEGVLAAT GDGATTARNA PVAVKEAVLP FHRFRKADGA QIDSLLGPEM KSTGEVMGID HDFGSAFAKS QTAAYGSLPS EGTVFVSVAN RDKRSLVFPV KRLADLGFKV LATEGTAEML RRNGIPCDEV RKHFEEPGAG RPARSAVEAI RAGDVAMVIN TPYGNSGPRI DGYEIRSAAV SMNIPCITTV QGASAAVQGI EASLRGDIGV MSLQELHSEL GN
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