| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1012 |
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| Symbol | |
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| ID | 5131959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1001058 |
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| End bp | 1004297 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640529937 |
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| Product | carbamoyl-phosphate synthase large subunit |
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| Protein accession | YP_001214470 |
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| Protein GI | 147669652 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
[COG2232] Predicted ATP-dependent carboligase related to biotin carboxylase |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAC CCAAGAAAGT TCTTATTATC GGCTCCGGCC CCATTATCAT CGGACAGGCA
GCCGAATTTG ATTACGCCGG TACCCAGGCC TGCAAAGCCA TGCGTGAAGA AGGGGTGGAA
TCCATACTGG TAAACTCCAA CCCGGCTACT ATTATGACTG ACGAAAATGT TGCGGACAGG
GTATATATCG AACCCCTGAC CGTTGAATCT ATAACCAAAA TCATTGAAAA AGAACGGCCG
GACGGTTTGC TGCCTACTCT GGGCGGACAA ACCGGACTTA ATCTGGCGGT AGATCTGGCA
GACGCAGGCG TGCTTGCCAA GTACAACGTG CGTTCACTGG GTACACCCAT AAATACCATC
CGCACCGCCG AAGACCGCGA ACTTTTTAAA GAATTGCTGA CTAAAATAGG CGAACCTGTT
CCTCCTTCGG AAACTGTGAC TACAGCCGAA GACGCACTCC GTGTTGCCCA TATGATAGGC
CTGCCGGTGG TAATACGCCC GGCCTATACC CTTGGCGGCA CCGGCGGCGG GTTCGCCCAT
AACTGGGACG AAGTTGAGGA AGTGGCTCAA ACAGGCTTGA ATGCCTCACC CATCCACCAG
ATACTGGTGG AAAAGTCGGT TGCCGGCTGG AAAGAAATTG AATATGAAGT AATGCGTGAC
GGGGCAGACA ACTGCATAAC TATCTGCAAT ATGGAAAACT TTGACCCGAT GGGGGTGCAT
ACCGGAGACA GCATTGTAGT TGTGCCCGTC CAGACCCTTA CCAACAAAGA ATCCCAGATG
CTCCGCACCG CTTCCATCAA GATAATACGG GCATTGGGTA TTGAAGGCGG CTGTAACGTA
CAGCTTTCTC TAAACCCGAA TGGCAACGAA TATTATGTAA TTGAGGTTAA TCCCAGAGTA
TCCCGTTCAT CAGCCCTAGC CAGCAAGGCC ACCGGTTACC CCATTGCCCG GGTGGCTTCC
AAGATAGCCA TTGGCAAACG GCTGGATGAG ATACCAAACG CCGTTACCGG CAAAACTCTG
GCCTGTTTTG AGCCTGCCGT AGACTATATT GTAGCTAAAA TCCCCCGCTT CCCCTTTGAC
AAATTTGCAC TTGGAGACCG GGGCTTGGGC ACGCAGATGA AAGCCACCGG GGAAGTCATG
GCCATTGACC GCAGTTTTGA AGCGGCTATC CACAAATCCA TCCGCTCTCT AGAGTTCGGC
AAGAAAACCG TACTCTGGGA AGACCGTAGC TGGATAATGG GAGATGACCT TTCCACCTAT
CCCCTTCATG CCCATGATAC CCGCTTGTGG ACAATACTGG CCGCTCTCCG CCGCGGGCAT
ACACCCGAAG CTATCCATGA AAAAACAATG GTAGATAACT GGTTTTTATA CAAACTGAAA
AATATTACCA ACATGGAAAA ACGCCTGCTT AAGGAAAATC TGACCCCCCT GCTTATGCTT
GAAGCCAAAC AAATGGGTTT TTCAGATGAA GAAATAGCCA CCCTGTCAGG CAAACTGGCC
GAACAGGTCA GGCAGACAAG GCTGGAATGG AATATAAAAC CGGTATTCAA AATGGTGGAC
ACCTGTGCCG CCGAATTTGA TGCCGCCACG CCATATTTCT ACTCCACCTA TGACGATGAA
AATGAAGCTA TCCCCCAGAA TGTTAAAAAA GCAGTGGTTA TAGGTTCGGG CCCTATCCGT
ATAGGACAGG GCATAGAGTT TGACTACTGC TCAGTGCATG CCGCTTGGGC TTTAGAAAAG
GCCGGCTTGC AGAGCATTAT GATAAACTCC AACCCCGAAA CGGTCTCAAC AGATTTTGAT
ACCTCAAACC GTCTGTATTT TGAAGCTCTG GACGAAGAAA GTGTTCGGGA TATTCTGGAA
AATGAAAACA TATCCGCACC CGAATCCACT CCCAGCATTG TCCAGTTCGG CGGGCAGACG
GCTATAAACT TGGCTGCTCC CCTTACCCGA AGCAGCAATC CCATCATCGG TTCATCAGCC
GAGGCTATAG ATCTGGCCGA AGACCGCCGC CGTTTTGAAC GCCTGCTATC CGAGATGGGC
ATTCCTCAAG CACCGGGGGC CGGCATAACC AGTCTGGACG AGGCTCTCAG CATAGCCGAC
AGTATTGGCT ACCCGGTGGT AGTCCGCCCA AGTTACGTAC TAGGTGGACG GGCTATGGAA
ATAGTCAGTG ATGCATCCGA CCTTGTACGC TACATGAGCG CCGCCATAGA GCTGAATACC
GGACACCCCA TACTGATAGA TAAATATCTG GTGGGCAAGG AAGTGGAAGT AGACGCCATT
GCAGACGGGG AAACCGTGTT TATCCCCGGC GTTATGGAGC ATATTGAACG GGCAGGCGTC
CATAGCGGAG ACTCCATGGC AGTTTACCCC ACCCAAAACC TGAATGAACA TGATTTGGCG
ACCATTACAG ACTATACTAT TCGCATCGGC AAAGCCCTGA ACGTACGCGG GCTTATGAAT
ATCCAGTTTG TAGTCTCCAA AGACCCCGAA GGGGGAGATA ATATAGTATA TGTACTGGAG
GTAAATCCCA GAGGCTCACG CACTGTCCCC TTCCTCTCAA AAGTAACAGG CGTACCCATG
GTGGACATAG CTGTAAACGT TATGCTGGGT AAAACTATAA ACGAACAGGG CTATCAAAAC
GGTATTATGC CTAATACGGA TTTGGTAGCC ATAAAAGCCC CTGTCTTCTC CATGGCAAAG
CTGGTGGGGG TGGATACCTA CCTTGGGCCG GAAATGAAAT CCACCGGTGA AGTAATGGGA
GTAGACCACA CCTTCAATAA AGCTCTGGTA AAAACCCTGC AGGCGGCATC TATAATGCTG
CCCGAAACAG GCACTCTCCT ATTCAGCATA GCTGACCGTG ACAAGGCCGA AGCCCTGCCC
CTTATCCGTA CCCTGCATGG GCTGGGATAT AATTTCTATG CTACCGAAGG CACTGCCGCC
ATGATAACCG CCGCCGGTAT AACAGTTAAG CAGATAAGCA AGAAACTGGA CGAGGGTCAC
CCCAATATTG TGGATATTAT CCGTAACGGC ACAGTCTGCG GAGTGATAAA TACCATGACC
GGTGGCAGAG TACCCCTGCG GGACGGTTTT TACATCCGCC GGGCAGCCGC CGAACGCAAA
GTGCCTTGCT TTACCTCCAT GGATACCGCC AAAGCCGCTG TGGAAGCTCT GGCAAACGGC
AACCGCCAGA TAACAGTCTT GCCCTTAAAT GAATACCGCC AGGGTAAAAG CGGCAGTTAG
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| Protein sequence | MNKPKKVLII GSGPIIIGQA AEFDYAGTQA CKAMREEGVE SILVNSNPAT IMTDENVADR
VYIEPLTVES ITKIIEKERP DGLLPTLGGQ TGLNLAVDLA DAGVLAKYNV RSLGTPINTI
RTAEDRELFK ELLTKIGEPV PPSETVTTAE DALRVAHMIG LPVVIRPAYT LGGTGGGFAH
NWDEVEEVAQ TGLNASPIHQ ILVEKSVAGW KEIEYEVMRD GADNCITICN MENFDPMGVH
TGDSIVVVPV QTLTNKESQM LRTASIKIIR ALGIEGGCNV QLSLNPNGNE YYVIEVNPRV
SRSSALASKA TGYPIARVAS KIAIGKRLDE IPNAVTGKTL ACFEPAVDYI VAKIPRFPFD
KFALGDRGLG TQMKATGEVM AIDRSFEAAI HKSIRSLEFG KKTVLWEDRS WIMGDDLSTY
PLHAHDTRLW TILAALRRGH TPEAIHEKTM VDNWFLYKLK NITNMEKRLL KENLTPLLML
EAKQMGFSDE EIATLSGKLA EQVRQTRLEW NIKPVFKMVD TCAAEFDAAT PYFYSTYDDE
NEAIPQNVKK AVVIGSGPIR IGQGIEFDYC SVHAAWALEK AGLQSIMINS NPETVSTDFD
TSNRLYFEAL DEESVRDILE NENISAPEST PSIVQFGGQT AINLAAPLTR SSNPIIGSSA
EAIDLAEDRR RFERLLSEMG IPQAPGAGIT SLDEALSIAD SIGYPVVVRP SYVLGGRAME
IVSDASDLVR YMSAAIELNT GHPILIDKYL VGKEVEVDAI ADGETVFIPG VMEHIERAGV
HSGDSMAVYP TQNLNEHDLA TITDYTIRIG KALNVRGLMN IQFVVSKDPE GGDNIVYVLE
VNPRGSRTVP FLSKVTGVPM VDIAVNVMLG KTINEQGYQN GIMPNTDLVA IKAPVFSMAK
LVGVDTYLGP EMKSTGEVMG VDHTFNKALV KTLQAASIML PETGTLLFSI ADRDKAEALP
LIRTLHGLGY NFYATEGTAA MITAAGITVK QISKKLDEGH PNIVDIIRNG TVCGVINTMT
GGRVPLRDGF YIRRAAAERK VPCFTSMDTA KAAVEALANG NRQITVLPLN EYRQGKSGS
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