| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1699 |
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| Symbol | |
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| ID | 8323790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1784117 |
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| End bp | 1787419 |
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| Gene Length | 3303 bp |
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| Protein Length | 1100 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952830 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_003110288 |
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| Protein GI | 256372464 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.54095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAGGG ATCCGAAGGT GGAGTCGGTG CTCGTCATCG GGTCTGGTCC CATCGTCATC
GGCCAGGCCA GCGAGTTCGA CTACTCCGGC GTACAGGCGT GCCGGGTCCT TCGAGAGGAA
GGGCTCCGCG TCATTTTGGC GAACTCGAAT CCAGCGACGA TCATGACCGA TCCCGAGTTC
GCCGACGCGA CCTACATCGA GCCCCTGACG CTCGAGGTGC TCGAGCGCAT CATCGAGGCC
GAACGGCCTG ATGCGGTGCT CCCGACGCTC GGCGGCCAGA CGGCGCTGAA TCTCGCGATG
GAGCTGGATG CGTCTGGTGT GCTCGAGCGA AGTGGGGTGC GGATGCTCGG GGCGCGACCG
GCCTCGATCG AGCTCGCGGA GAACCGCGAT GCATTCCGCC AGCTGCTCAT GAGCATCGAC
GAGCAGCTGG CGGTGCGCGG GCGGCTCGTG CGGTCCCTCG AGGAGGGAAG GGACGTCGCC
GACGAGCTCG GTTACCCGCT CATGCTGCGA CCCTCGTACA TCCTCGGCGG AGCCGGAACC
GGGATCGCGA CCGACCCCAG CTCCTTCGAG GCGATGCTGC GGGCCGGTCT CATCGCCTCG
CCGGTCGGCG AGGTGTTGGT CGAGGAGTCG ATCGCCGGTT GGAAGGAGTT CGAGCTCGAG
GTCATGCGCG ACGCGAATGA CAACTGCGTC GTCGTGTGTT CGATCGAGAA CGTCGACCCG
ATGGGGGTTC ACACTGGTGA CTCGATCACC GTTGCTCCTG CACAGACGCT GACGGATCTC
GAGTACCAGC GCATGCGGTC GCTCTCGTTC GAGATCCTCC GACGCGTGGG TGTCGAGACG
GGCGGCTCGA ACGTGCAGTT CGCTGTGGAG CCGACCAGCG GCCGCATGGT CGTGGTCGAG
ATGAACCCCC GTGTGTCGCG CTCGAGCGCG CTGGCATCGA AGGCCACCGG GTTCCCGATC
GCCAAGATCG CGACACGCTT GGCGATCGGC TACACGCTCG ACGAGATCAT GAACGACATC
ACGGGTGTCA CGCCAGCCAG TTTCGAGCCG GCACTCGATT ACGTGGTGGT CAAGGTGCCG
CGCTGGGTCT TCGAGAAGTT CGAAGGTGCC GAGGGTATTC TCGGGACGCG GATGCAGTCG
GTCGGGGAGA CCATGGCGAT CGGCCGTAGT TTCGCCGAGG CGCTGCAGAA GGCGCTCCGC
GGTATCGAGC GGTCGCGGGG AGGGTTCGGC GCCGATCCGG CCGAGGTCAC CTGGCAGGCG
TACTCCGATG ACGCCCTGGC CACGCTCGTC GCTGTGCCGA CCGAGCAGCG AGTCTTCGCC
GTTGGCGAGG CACTCCGGCG CGGTTGGAGC ATCGAGCGCG TTGCCGAGCT GAGCCGGATC
GACCCGTGGT TCATCGGGGA AATGGCGGGC ATCGTCGCGC GTGCAGCCGA CATCCGTGGC
CGCGATCTCG CCTCACTCGG TGCCGACGAA CTGCTCGATC TGAAGCGATG GGGCTTCTCG
GATCTCCAAC TCGCGTGGCT GCTCGGTGTG GACGAGACGG CGGTTCGCGA GCATCGGCAC
ACCGTAGGGG TGCGCGCTGT CTACAAGGCG GTCGACACCT GCGCTGGCGA GTTCCCAGCA
CGCACGCCGT ACTACTACGG GACCTACGAG GAGGAGAGCG AGACCGTCGG ATCGAATCGG
CCAAGTGTGA TCATCATCGG CGCTGGCCCG AATCGCATCG GCCAGGGCAT CGAGTTCGAC
TACTGCTGCG TCCATGCAGC ATTCGCGCTT CGTGAGGCCG GTGTCGATGC GATCATGGTC
AACTCGAACC CGGAGACGGT CTCGACCGAC TACGACACCT CCTCGCGCCT GTACGTGGAG
CCCTTGGTGA CCGAACACGT GCTCGACGTG ATCGCCGAGG AACAGCGTCT CGGCTCACTC
CAGGGTGTCA TCGTGTCGCT CGGAGGCCAG ACACCACTCA AGCTGGCTCG AGACATCGAT
CCGTCGCTGG TCCTCGGCAC TTCGCCGGAC TCGATCGACG TCGCGGAGGA CCGCCGGCGT
TGGTCTGCCC TGTGCGAGCG CCTCGGCATC CGCCAGCCCC CGGGCGGCAC CGTGACCTCG
CTCGCCGAAG CGGAGGCGGT GGTCGCTGCG ATCGGCCTGC CCGTGTTGGT GCGCCCGAGC
TATGTGCTCG GCGGGCGAGC CATGGAGATC GTCTACTCGG AGGACGAGCT GCGCAGCGCG
TTCTCTCGGC TCGTCGATCT GGCGGCCGAG GGCGCGATCT CGCAGGACCG ACCGATCCTG
ATCGATCGCT TCCTCGAAGG TGCGATCGAG GTCGACGTCG ACGCGGTTCG CGATCGCGAG
GGCGCGTGCT GGATCGGTGC GGTCATGGAG CACGTCGAGG AGGCTGGCGT TCACTCGGGT
GACTCGGCGT GCACGATCCC GCCGGTCTCA CTTGCTCCCG CCCTCGTCGC AGAGATCGAG
GCCCAGACGC GTGCGATCGC GGACGCACTC GATGTGGTCG GGCTCATCAA CGTACAGTTC
GCCGTGGCGG ACGGCACGGT GTTCGTCATC GAGGCCAATC CGCGTGCGTC GCGGACGGTT
CCGTTCGTCG CCAAGGCGAC GGGTGTCGCG CTCGTCAAGA TCGCCACGCG TCTCATGCTG
GGATCGACCC TGCGTGATCT CGAACGAGAG GGCCTCTTCG TGCCTCGCCG CGTCACCAGT
TACGTCGCGG TGAAGGAGGC GGTCCTCCCG TTCGGCAGGT TCCGCGGGGC CGACAGCATC
CTCGGGCCCG AGATGCGCTC GACCGGTGAG GTGATGGGGA TCGATCGCAC GATGCCGATG
GCGTTCGCCA AGGCACAACT CGCCGCCGGT ACGCGTCTTC CCCAGCAGGG CACGGTCCTC
GTGACCGTCG CCGATCGCGA CAAGGAGGCG CTCGTCCCGA TCGCCGAGCG ACTGGTGGCC
CACGGGTTCG ACCTTGCTGC GACCGAGGGG ACCGCCTCCT GGCTTCAGGC TCACGGCGTC
CCTGTTGCGC GCCTCGTCGC GAAGGTCACC GAGGAAGAGG ATCTCGGCGA GCGTGCTGCG
CCGGAGGGTT TCGTCGATGC CGTACGGCTG GTGCGCTCCG GCGAGGTTGC GCTCATCATC
AACACGCCGA GAGGGAGTGG CCCGCGGCGA GACGGTTACC GCATCCGCAC GGCAGCGCTC
GAAGCCAAGA TCCCGTTGAT CACGACGCTG GAGGCCGCTC GCGCGGCTGT GGCAGCGGTC
GAGGCGCTCG CACGTCAGCC GCTGACCGTG CGGCCGCTGC AGGCCTATCA CGAGGAAACC
TGA
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| Protein sequence | MPRDPKVESV LVIGSGPIVI GQASEFDYSG VQACRVLREE GLRVILANSN PATIMTDPEF
ADATYIEPLT LEVLERIIEA ERPDAVLPTL GGQTALNLAM ELDASGVLER SGVRMLGARP
ASIELAENRD AFRQLLMSID EQLAVRGRLV RSLEEGRDVA DELGYPLMLR PSYILGGAGT
GIATDPSSFE AMLRAGLIAS PVGEVLVEES IAGWKEFELE VMRDANDNCV VVCSIENVDP
MGVHTGDSIT VAPAQTLTDL EYQRMRSLSF EILRRVGVET GGSNVQFAVE PTSGRMVVVE
MNPRVSRSSA LASKATGFPI AKIATRLAIG YTLDEIMNDI TGVTPASFEP ALDYVVVKVP
RWVFEKFEGA EGILGTRMQS VGETMAIGRS FAEALQKALR GIERSRGGFG ADPAEVTWQA
YSDDALATLV AVPTEQRVFA VGEALRRGWS IERVAELSRI DPWFIGEMAG IVARAADIRG
RDLASLGADE LLDLKRWGFS DLQLAWLLGV DETAVREHRH TVGVRAVYKA VDTCAGEFPA
RTPYYYGTYE EESETVGSNR PSVIIIGAGP NRIGQGIEFD YCCVHAAFAL REAGVDAIMV
NSNPETVSTD YDTSSRLYVE PLVTEHVLDV IAEEQRLGSL QGVIVSLGGQ TPLKLARDID
PSLVLGTSPD SIDVAEDRRR WSALCERLGI RQPPGGTVTS LAEAEAVVAA IGLPVLVRPS
YVLGGRAMEI VYSEDELRSA FSRLVDLAAE GAISQDRPIL IDRFLEGAIE VDVDAVRDRE
GACWIGAVME HVEEAGVHSG DSACTIPPVS LAPALVAEIE AQTRAIADAL DVVGLINVQF
AVADGTVFVI EANPRASRTV PFVAKATGVA LVKIATRLML GSTLRDLERE GLFVPRRVTS
YVAVKEAVLP FGRFRGADSI LGPEMRSTGE VMGIDRTMPM AFAKAQLAAG TRLPQQGTVL
VTVADRDKEA LVPIAERLVA HGFDLAATEG TASWLQAHGV PVARLVAKVT EEEDLGERAA
PEGFVDAVRL VRSGEVALII NTPRGSGPRR DGYRIRTAAL EAKIPLITTL EAARAAVAAV
EALARQPLTV RPLQAYHEET
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