Gene HS_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1642 
Symbol 
ID4241169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1873643 
End bp1874821 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content35% 
IMG OID638105228 
Producthypothetical protein 
Protein accessionYP_719847 
Protein GI113461778 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAC CATTAAATTT TGTGATGATT TCTCCACATT TTCCTGCAAA CTTTGAAACT 
TTTGCCGTTC GTTTAAAGGA GTGTGGTTTT AATACATTAG GTATTGCAGA CACACCTTAT
GAACAGTTAA GTGAAAACTT GCGTAATTCC TTAACGGAAT ATTATCGTGT TGATAATATG
GAAGACTACG AGCAAGTCTA TCGTGCTGTT GGTTATTTTG CACATAAGTA TGGTCGAATT
GATCGTATTG AATCTCATAA TGAATACTGG CTTGAGCTTG ATGCAAAATT ACGTACGGAT
TTTAATGTTC CCGGGTATAA GAACGATGAT ATGTTGGCAA TCAAAACCAA AGCACAAATG
AAAGAAATTT TTCGTCAAGC AGGTCTGAAA GTTGCTCAGG GAAAAGTATT TAACTCTGAT
GATGAAGCAC GTAAGTTAGC TAAAAAATTG AAGTTTCCTG TGATTATTAA GCCAAATTCA
GGAGTGGGTG CAAGCGATAC TTATAAAATT AAGTCGGTAC AAGAATTAGA GGACTTTTTT
TCTTATAAAA ATGCACACGT TGAATACATC ATGGAAGAAT TTATTGATGG GGACATTATT
ACCTTTGATG GTTTAACCGA TAAAGAGGGC AATATTGTGT TCTATTCCGG TCTTGAATAT
TCCGAGTGCG TATTGGATAC CGTAGAAAAT GATAACGATA TGTTCTATTA CGTTCCTCGA
GAAATTTCAA CCGACTTAAT TAAATTAGGA CAAAAATGTG TTGATGCTTT CAACGTTCGT
GAGCGTTTCT TCCATTTTGA GTTTTTCCGT GTGAAAAAAA CAGGTGATTT GATGCCGTTA
GAAATCAATT GTCGCCCACC CGGTGGCTTG ACTATTGATA TGTGGAATTA TGCAAATGAT
TTTGATGTAT TCAGAGAATA CGCCAATATT GTGAAAGAAA ATAAATTCTA CACAAATATT
ACACACCCAT GGAATGTGGT ATATATCTCA CGTAAAGCAA ATAAGAATTA TGTAAACGCC
ATTGAAGATG TGCAACAAAA ATATTCTACT AATATTATTA GTGTGCAAAC TGTACCCGGC
GTTTTTGCCA AAATTATGGG GGAACATGGC ATTTTAGCTC GCACAGAAAC TTTAGATCAG
ATGCATGAAA TTGCACAATT TGCACAACAA AAAGCATAA
 
Protein sequence
MSKPLNFVMI SPHFPANFET FAVRLKECGF NTLGIADTPY EQLSENLRNS LTEYYRVDNM 
EDYEQVYRAV GYFAHKYGRI DRIESHNEYW LELDAKLRTD FNVPGYKNDD MLAIKTKAQM
KEIFRQAGLK VAQGKVFNSD DEARKLAKKL KFPVIIKPNS GVGASDTYKI KSVQELEDFF
SYKNAHVEYI MEEFIDGDII TFDGLTDKEG NIVFYSGLEY SECVLDTVEN DNDMFYYVPR
EISTDLIKLG QKCVDAFNVR ERFFHFEFFR VKKTGDLMPL EINCRPPGGL TIDMWNYAND
FDVFREYANI VKENKFYTNI THPWNVVYIS RKANKNYVNA IEDVQQKYST NIISVQTVPG
VFAKIMGEHG ILARTETLDQ MHEIAQFAQQ KA