| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0380 |
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| Symbol | |
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| ID | 6091785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 364703 |
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| End bp | 368002 |
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| Gene Length | 3300 bp |
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| Protein Length | 1099 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642487558 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001738419 |
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| Protein GI | 170288181 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG0439] Biotin carboxylase
[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAAGA GAGAAGACAT AAAGAGGATC CTCGTTATAG GATCCGGTCC GATCACAATC
GGTCAGGCTG CGGAGTTCGA CTATTCAGGC ACTCAGGCCC TGAAGGCTCT CAAAAGCGCC
GGCTACGAGG TGATCATAGT TAACTCCAAC TCCGCAACCA TAATGACAGA TCCGGAGTTT
TCCGATGCCG TTTACATAGA ACCTCTAACG GTGGAGTTCC TCGAAAAGAT TATTGAAAAA
GAAAGACCGG ATGCTCTGCT CCCCACCCTC GGAGGACAGA CCGCCCTGAA TCTCGCTGTG
GAACTCGCCG AAAGGGGGAT TCTCGATAAA TACGGTGTTC AGTTGATCGG TGCAAAGCTC
GACTCGATAA AGAAGGCCGA GGATAGAGAA CTCTTCAAGG AAACCATGGA AAAGGCAGGT
CTTGAGGTTC TGAGAAGCAG ACTCGTGAAC AACCTCGCCG ATGCACTGGA GACGGCAAGA
GAATTCGGCT ACCCCGTCAT AATAAGGCCG AGTTTCACCC TGGGTGGAAC AGGTGGTGGA
ATCGCGTTCA ATGAAGAAGA ACTGAGAGAC ATCGTAACAA AGGGTCTCAT AGAAAGCCCG
GTTCACACGG TCCTCATAGA GGAATCAGTC CTCGGCTGGA AGGAGTACGA ACTCGAAGTG
GTGAGAGATG GAGCTGGAAA CTTTATAGTG GTGTGTTCCA TAGAGAATCT CGACCCGATG
GGAATACACA CCGGAGATTC CATAACGGTG GCACCTGCGC AAACACTCAC GGACGTTGAG
TACCAGAGAA TGAGGGACGC AGCTCACAAA GTGATCGATG CGATCGGTAT AGAAACGGGT
GGATCGAACA TTCAGTTCGC CGTGGATCCA GAAACCGGTA GAATGGTCGT CATAGAGATG
AACCCAAGGG TCTCCAGGTC ATCCGCACTG GCATCGAAGG CAACGGGCTA TCCCATCGCG
AAGGTCGCAG CTCTCCTTGC CGTTGGTTTC ACTCTCGATG AGATACCGAA CTACATCACC
GGCAAAACGA TGGCCGCCTT CGAACCCTCC ATAGACTACG TCGTGGTGAA GATACCGAGA
TTCCAACTCG AAAAGTTCCC CGGGGCCGAC CCAAGACTGA ACACCCAGAT GAAGTCCGTA
GGAGAAGTGA TGGCGATAGG CAGGACCTTC AAAGAAGCCT TGGGAAAAGC CCTCAGATCC
CTTGAACTCG ATGCCGCTCC CAAACTGGAT CTTGAACACA TAAGAGAACA CCTTGCAAAT
CCAACGCCGG AAAGGATCTC CTACATCTTT GCTGCGTTCA GGAACGGAAT GGATGTAGAG
GAAGTGCACG AACTCACTAA GATCGACAGA TGGTTCCTCA GAGAGATGAA AGCGTGTATA
GAACTCGAGG AAGAGCTGAA GTTGAAGAAA TTCGATGTGG AGATCCTGAA GAAAGCAAAA
CAGTGGGGAT ACTCAGACAG GGAAATTGCG GAGATATGGG GTGTTTCAGA AAAAGAAATC
AGAAAGATGA GAGAAGACAA CCGGATCTTT CCCGTCTACA AGATGGTGGA CACCTGCGCC
GCTGAGTTCG AAGCACAGAC CCCGTATTAC TACTCCACCT ACAACGGCGT GGAGAACGAA
GCGGTACCTT CAGACAGAGA GAAGATCATG ATTCTGGGAT CCGGTCCCAA CAGGATAGGT
CAGGGAATAG AATTCGACTA CACGAACGTC CACGGAGTGT GGGCCTTCCA GGAAGAAGGA
TACGAAACCA TAATGGTCAA CTCCAACCCC GAAACCGTTT CGACTGACTA CGACACTTCA
GACAGGCTTT ACTTCGAACC GCTCACCGTT GAAGATGTTC TGGAGATCGT GAGGAACGAA
AAACCGAAGG GAGTGGTGGT GGCATTCGGC GGTCAGACAC CACTGAAGAT AGCAAAATAC
CTCGTAGAAG AGAGGGTGAA CATCATAGGA ACGAGCTTCG AATCGATTGA GATCGCCGAA
GACAGGGAAA AATTCGCTAA GCTTCTGAAA CAAATCGGGT TGAAGTGCCC TCCATTTGGA
ACGGCATCGT CCGTGGAAGA AGCGTTGAGG GTAGCAGAGA ATCTTGGATA CCCCGTTCTT
GTGAGGCCGA GCTACGTGCT CGGAGGAAGG GCCATGGCCA TTGTGGACAC TCCTCAGGAA
CTCGAAATGT ACGTCAAGGA AGCGGCCGTT GTCTCACCGG GATACCCCGT TCTGATAGAC
AAATTTCTTG AAGACGCGAT AGAACTCGAC GTAGATGTCG TGTCGGATGG AAAATACGTG
TGGATAGCAG GATTGATGGA GCAGATAGAA GAAGCCGGAG TCCATTCGGG AGATTCCGCG
TGTGTTCTGC CCCCTGTGAG TCTTTCTGAG AAACTCGTGG AAGAGATAGA GGAAACCGTT
TACAAGCTTG TAAAAGCGCT GAAGGTTGTG GGAGTTGCGA ACATACAGCT TGCGGTGAAA
GACGAGGAGA TCTACATCAT AGAGGCAAAT CCCAGAGCAT CGAGAACAGT TCCTTTCGTG
AGCAAAGCGA TCGGAATCCC CGTGGCGAGA ATCGCCGCCA AAATCATGGT GGGAAGAAAC
CTGCCCGAGC TCCTTTCTGA GTACTTCCCA TATCCCACAA GACCAGGGGT AAAAGTTGAT
AAACTGGGAG AGAGTGAGAT CCTCCCAACT CCCTGGCCGA AGATGTTCTC TGTGAAAGAG
GTGGTGATAC CGTTCCATAA GTTCCCGGGA ACGGATGTAC TTCTCGGGCC AGAGATGCGC
TCCACAGGAG AAGTGATGGG AATCGGTGAA GATTTCGCAG AGGCATTCGC GAAGGCTCAG
ATAGCCGCCG GAAACCCCCT GCCAACAACG GGTGCAATCC TCGCAACCGT CGCAGACAAA
GACAAGAGGG AAGCCGTTCC TCTCTTGGCT CACCTCGCAG ACATGGGCTT TGAGATATAC
GCAACAAGAG GAACGGCAAA GGCTCTGCAG TCACACGGTG TGGAAGTGAA GGTGGTTCCA
AAGGTGGGAG AAGGAAGACC GGACGTGATA GATCTTCTGG AGCAGGGAAA GATATCCCTT
GTCGTGATCA CCCAGTCCAG TGATGAACCT GCGCTCGTCG CCGTCTCTCA TGGAAAGGAA
CCCTTCAAAG TTGAAGGAAG AAGAACCGTC GGATACATGA TAAGAACCAC GGCGCTGAAG
AGGAAGATCC CATACCTGAC CACAGTCGAG TCACTCAGAG CAGCGGTGGC GGCGATCAGA
AAGATGAAGA AAGGCTCTAT CGTGAAGGTG AGAAGACTCA CCGACACATG GAAAATGTGA
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| Protein sequence | MPKREDIKRI LVIGSGPITI GQAAEFDYSG TQALKALKSA GYEVIIVNSN SATIMTDPEF
SDAVYIEPLT VEFLEKIIEK ERPDALLPTL GGQTALNLAV ELAERGILDK YGVQLIGAKL
DSIKKAEDRE LFKETMEKAG LEVLRSRLVN NLADALETAR EFGYPVIIRP SFTLGGTGGG
IAFNEEELRD IVTKGLIESP VHTVLIEESV LGWKEYELEV VRDGAGNFIV VCSIENLDPM
GIHTGDSITV APAQTLTDVE YQRMRDAAHK VIDAIGIETG GSNIQFAVDP ETGRMVVIEM
NPRVSRSSAL ASKATGYPIA KVAALLAVGF TLDEIPNYIT GKTMAAFEPS IDYVVVKIPR
FQLEKFPGAD PRLNTQMKSV GEVMAIGRTF KEALGKALRS LELDAAPKLD LEHIREHLAN
PTPERISYIF AAFRNGMDVE EVHELTKIDR WFLREMKACI ELEEELKLKK FDVEILKKAK
QWGYSDREIA EIWGVSEKEI RKMREDNRIF PVYKMVDTCA AEFEAQTPYY YSTYNGVENE
AVPSDREKIM ILGSGPNRIG QGIEFDYTNV HGVWAFQEEG YETIMVNSNP ETVSTDYDTS
DRLYFEPLTV EDVLEIVRNE KPKGVVVAFG GQTPLKIAKY LVEERVNIIG TSFESIEIAE
DREKFAKLLK QIGLKCPPFG TASSVEEALR VAENLGYPVL VRPSYVLGGR AMAIVDTPQE
LEMYVKEAAV VSPGYPVLID KFLEDAIELD VDVVSDGKYV WIAGLMEQIE EAGVHSGDSA
CVLPPVSLSE KLVEEIEETV YKLVKALKVV GVANIQLAVK DEEIYIIEAN PRASRTVPFV
SKAIGIPVAR IAAKIMVGRN LPELLSEYFP YPTRPGVKVD KLGESEILPT PWPKMFSVKE
VVIPFHKFPG TDVLLGPEMR STGEVMGIGE DFAEAFAKAQ IAAGNPLPTT GAILATVADK
DKREAVPLLA HLADMGFEIY ATRGTAKALQ SHGVEVKVVP KVGEGRPDVI DLLEQGKISL
VVITQSSDEP ALVAVSHGKE PFKVEGRRTV GYMIRTTALK RKIPYLTTVE SLRAAVAAIR
KMKKGSIVKV RRLTDTWKM
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