| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4094 |
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| Symbol | |
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| ID | 5541605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5307035 |
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| End bp | 5308204 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640896206 |
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| Product | biotin carboxylase-like protein |
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| Protein accession | YP_001434144 |
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| Protein GI | 156744015 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.138669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.680577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGA ACATCGTTTT TCTCTCACCG CACTTCCCGC CGAACTGGTA TCTGTTTTGC
GTGCGCCTGC GCAATCTGGG CGCGAATGTT CTGGGCGTCG CCGACGAACC GTATGAACTG
CTGCACCCGG ACCTGCGCAC TGCATTGACC GAATACTACC GGGTATCGGA TCTGCACCAT
TACGACGAGG TGTTGCGTGC GCTCGGCTAT TTCACGCACC GCTATGGCAA AATCCAGCGG
GTCGACTCCC TGAACGAATA CTGGCTGGAA ACCGAAGCGC GGTTGCGCAC CGATTTCAAC
ATCGAAGGAC CGAAAATCAC CGATCTGCCC GGCATCAAGC GGAAATCGGA AATGAAGCGC
CTTTTCACCC GCGCACAGGT GGACGTAGCG CGTGGGATTC TGGCGCATTC ACCGGCGCAG
GTGCGCGCTT TCGCCGTTGA GGTCGGCTAC CCGCTCGTCG CCAAGCCGGA CGTTGGCGTC
GGCGCGAATC ACACGTACAA GATTACGAGC GACGCCGAAC TCGATGCCTT CCTGTCGCGC
CAGCCTGAGG GGTTTCTCAT CGAGGAGTAT GTGCATGGCG TCATTCAGAC TTTCGATGGA
CTTGCAGACC GTGATGGCGA ACCGGTCTTC TTTACGTCGA TGCAGTACAG CAACGGTGTC
CTGGAGGTTG TCAACAACGA CGACGATATT TACTATCTGA CCGAGCGTGA CATTCCGCCC
GATCTCGAAC AGGCAGGGCG GCGCATCCTC AAGATATTCA ATGTGCGCGA ACGATTCTTT
CACTTCGAGT TCTTCCGCAC TCCTAAAGGG CGATTGGTGG CGCTCGAAGT CAACATGCGT
CCTCCGGGCG GGCTGAGCAT CGATATGTTC AACTACGCCG GCAACATTGA CCTGTACAAT
GCATGGGCGA ATGTGTTGAT CAATCATCGC GTCAGCATCC CGCCGACGCG GCTGTACCAC
GTCTGTTACG CTGGACGCAA ACCGTTCCGT TCCTATGCTT TGACCCACGA AGAGGTGCTG
ATCCGCTTCG GCGATTGCAT CGTCCACCAC CAGCCGATGC ATCCGCTGTT TCATCGAGCG
ATGGGTGCGT ATGCATATCT GATCAGATCG CCGGATCGCG CGGAAGTAAT TGCAATTGCG
CAGGAGATTC AGCGGTTGAG CGTGTGTTGA
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| Protein sequence | MTMNIVFLSP HFPPNWYLFC VRLRNLGANV LGVADEPYEL LHPDLRTALT EYYRVSDLHH
YDEVLRALGY FTHRYGKIQR VDSLNEYWLE TEARLRTDFN IEGPKITDLP GIKRKSEMKR
LFTRAQVDVA RGILAHSPAQ VRAFAVEVGY PLVAKPDVGV GANHTYKITS DAELDAFLSR
QPEGFLIEEY VHGVIQTFDG LADRDGEPVF FTSMQYSNGV LEVVNNDDDI YYLTERDIPP
DLEQAGRRIL KIFNVRERFF HFEFFRTPKG RLVALEVNMR PPGGLSIDMF NYAGNIDLYN
AWANVLINHR VSIPPTRLYH VCYAGRKPFR SYALTHEEVL IRFGDCIVHH QPMHPLFHRA
MGAYAYLIRS PDRAEVIAIA QEIQRLSVC
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