More than 300 homologs were found in PanDaTox collection
for query gene Mbar_A2896 on replicon NC_007355
Organism: Methanosarcina barkeri str. Fusaro



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007355  Mbar_A2896  transcriptional regulator  100 
 
 		 169 aa  345  2e-94  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  hitchhiker  0.00223348 
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  42.86 
 
 		 170 aa  152  2e-36  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_013385  Adeg_1897  two component transcriptional regulator, winged helix family  41.18 
 
 		 229 aa  93.6  1e-18  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_2095  two component transcriptional regulator, winged helix family  43.4 
 
 		 229 aa  92.4  2e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  40.16 
 
 		 227 aa  92  3e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.0239565 
 
 
-
 
NC_003909  BCE_2041  DNA-binding response regulator  37.82 
 
 		 225 aa  89.4  2e-17  Bacillus cereus ATCC 10987  Bacteria  normal  0.0972255  n/a   
 
 
-
 
NC_005945  BAS1816  DNA-binding response regulator  37.29 
 
 		 254 aa  89.7  2e-17  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A2062  DNA-binding response regulator  37.82 
 
 		 225 aa  89.4  2e-17  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000169038  n/a   
 
 
-
 
NC_007530  GBAA_1955  DNA-binding response regulator  37.29 
 
 		 228 aa  89.7  2e-17  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_3564  two component transcriptional regulator  41.03 
 
 		 230 aa  89.4  2e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.153344  normal  0.125376 
 
 
-
 
NC_005957  BT9727_1790  response regulator  37.29 
 
 		 254 aa  88.6  4e-17  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0306127  n/a   
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  37.4 
 
 		 234 aa  88.6  4e-17  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  37.4 
 
 		 234 aa  88.6  4e-17  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_011725  BCB4264_A1962  DNA-binding response regulator  38.66 
 
 		 225 aa  88.2  5e-17  Bacillus cereus B4264  Bacteria  normal  0.597164  n/a   
 
 
-
 
NC_006274  BCZK1772  response regulator  37.29 
 
 		 254 aa  87.8  6e-17  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  36.13 
 
 		 235 aa  87.8  6e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011773  BCAH820_1991  DNA-binding response regulator  37.29 
 
 		 254 aa  87.4  8e-17  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.9362699999999994e-45 
 
 
-
 
NC_011772  BCG9842_B3366  DNA-binding response regulator  38.66 
 
 		 225 aa  87.4  9e-17  Bacillus cereus G9842  Bacteria  normal  0.166078  hitchhiker  0.00000000000000126215 
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  38.98 
 
 		 236 aa  86.7  1e-16  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  decreased coverage  0.0000906935 
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  38.84 
 
 		 226 aa  86.3  2e-16  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.575064 
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  37.82 
 
 		 236 aa  86.7  2e-16  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  38.33 
 
 		 223 aa  85.9  2e-16  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  37.7 
 
 		 229 aa  86.3  2e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  1  normal  0.258551 
 
 
-
 
NC_011830  Dhaf_1285  two component transcriptional regulator, winged helix family  34.92 
 
 		 234 aa  86.7  2e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.477652  n/a   
 
 
-
 
NC_010320  Teth514_1155  two component transcriptional regulator  39.67 
 
 		 231 aa  85.5  3e-16  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000430064  n/a   
 
 
-
 
NC_014248  Aazo_2887  LuxR family two component transcriptional regulator  34.92 
 
 		 225 aa  85.1  4e-16  'Nostoc azollae' 0708  Bacteria  normal  0.526109  n/a   
 
 
-
 
NC_009380  Strop_1197  response regulator receiver  36.36 
 
 		 230 aa  85.1  5e-16  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  36.44 
 
 		 236 aa  84.7  6e-16  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_2625  two component transcriptional regulator  37.82 
 
 		 232 aa  84.3  7e-16  Marinomonas sp. MWYL1  Bacteria  normal  1  unclonable  0.00000000000561273 
 
 
-
 
NC_010320  Teth514_0766  two component transcriptional regulator  38.84 
 
 		 231 aa  84.3  7e-16  Thermoanaerobacter sp. X514  Bacteria  normal  0.585906  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  42.16 
 
 		 227 aa  84.3  7e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  35.25 
 
 		 228 aa  84.3  7e-16  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_011830  Dhaf_1665  two component transcriptional regulator, winged helix family  39.83 
 
 		 232 aa  84.3  7e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_0488  two component transcriptional regulator, winged helix family  38.14 
 
 		 235 aa  84.3  8e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.00220414 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  39.82 
 
 		 239 aa  84  8e-16  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  38.02 
 
 		 225 aa  84.3  8e-16  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_010180  BcerKBAB4_5511  two component transcriptional regulator  37.5 
 
 		 236 aa  84.3  8e-16  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  normal  0.567595 
 
 
-
 
NC_011726  PCC8801_1936  two component transcriptional regulator, winged helix family  37.19 
 
 		 246 aa  84  9e-16  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_3628  two component LuxR family transcriptional regulator  34.13 
 
 		 225 aa  84  9e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  0.717242  normal  0.142765 
 
 
-
 
NC_013161  Cyan8802_1963  two component transcriptional regulator, winged helix family  37.19 
 
 		 246 aa  84  9e-16  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.470012 
 
 
-
 
NC_010655  Amuc_1110  two component transcriptional regulator, winged helix family  36.13 
 
 		 234 aa  84  9e-16  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_1115  two component transcriptional regulator, winged helix family  37.19 
 
 		 243 aa  83.2  0.000000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.0950226  normal  1 
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  38.02 
 
 		 232 aa  83.6  0.000000000000001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_010424  Daud_0377  response regulator receiver modulated diguanylate cyclase  35.48 
 
 		 314 aa  83.2  0.000000000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  35.83 
 
 		 225 aa  83.6  0.000000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_011892  Mnod_8578  two component transcriptional regulator, winged helix family  37.5 
 
 		 231 aa  82.8  0.000000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0565107  n/a   
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  40.16 
 
 		 237 aa  82.8  0.000000000000002  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.421984 
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  37.1 
 
 		 240 aa  82.8  0.000000000000002  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal  1 
 
 
-
 
NC_011830  Dhaf_0940  two component transcriptional regulator, winged helix family  38.33 
 
 		 237 aa  83.2  0.000000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.324642  n/a   
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  35.25 
 
 		 229 aa  82.4  0.000000000000002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.179681 
 
 
-
 
NC_007604  Synpcc7942_0095  two component transcriptional regulator  35.25 
 
 		 249 aa  82.8  0.000000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_1824  two component transcriptional regulator  35.29 
 
 		 225 aa  83.2  0.000000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.529032  n/a   
 
 
-
 
NC_007973  Rmet_1652  DNA-binding response regulator CreB  39.5 
 
 		 232 aa  83.2  0.000000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  37.1 
 
 		 236 aa  82.8  0.000000000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal  1 
 
 
-
 
NC_008639  Cpha266_0880  two component transcriptional regulator  38.14 
 
 		 236 aa  82.8  0.000000000000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  41.35 
 
 		 234 aa  82.8  0.000000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  38.02 
 
 		 225 aa  82.4  0.000000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013161  Cyan8802_1605  two component transcriptional regulator, LuxR family  34.19 
 
 		 216 aa  82  0.000000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1916  two component transcriptional regulator  37.5 
 
 		 228 aa  82.4  0.000000000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.400732  n/a   
 
 
-
 
NC_011729  PCC7424_4207  two component transcriptional regulator, winged helix family  35.16 
 
 		 247 aa  82  0.000000000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_012793  GWCH70_2219  two component transcriptional regulator, winged helix family  36.8 
 
 		 240 aa  82.4  0.000000000000003  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_011726  PCC8801_1580  two component transcriptional regulator, LuxR family  34.19 
 
 		 216 aa  82  0.000000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009511  Swit_3577  two component transcriptional regulator  35.9 
 
 		 232 aa  82  0.000000000000004  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  0.70324 
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  37.19 
 
 		 226 aa  81.6  0.000000000000004  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_009972  Haur_0447  two component transcriptional regulator  38.02 
 
 		 229 aa  82  0.000000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000245325  n/a   
 
 
-
 
NC_009972  Haur_0804  two component transcriptional regulator  39.45 
 
 		 236 aa  81.6  0.000000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.324741  n/a   
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  34.45 
 
 		 224 aa  81.6  0.000000000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  36.29 
 
 		 236 aa  81.6  0.000000000000005  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal  1 
 
 
-
 
NC_010501  PputW619_4871  DNA-binding response regulator CreB  40.34 
 
 		 226 aa  81.6  0.000000000000005  Pseudomonas putida W619  Bacteria  normal  0.608103  normal  0.305164 
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  42.16 
 
 		 225 aa  81.6  0.000000000000005  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_012793  GWCH70_0170  two component transcriptional regulator, winged helix family  33.33 
 
 		 232 aa  81.6  0.000000000000005  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  36.97 
 
 		 229 aa  81.6  0.000000000000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_010814  Glov_3569  two component transcriptional regulator, winged helix family  34.65 
 
 		 235 aa  81.3  0.000000000000006  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  37.19 
 
 		 229 aa  81.3  0.000000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_008048  Sala_0821  two component transcriptional regulator  35.9 
 
 		 232 aa  81.3  0.000000000000006  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.60557  hitchhiker  0.00503775 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  36.67 
 
 		 230 aa  81.3  0.000000000000007  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_013440  Hoch_3814  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  31.67 
 
 		 1131 aa  80.9  0.000000000000007  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.257486 
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  40 
 
 		 226 aa  80.9  0.000000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008043  TM1040_3335  two component transcriptional regulator  35 
 
 		 230 aa  80.9  0.000000000000007  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.428008 
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  35.2 
 
 		 231 aa  80.9  0.000000000000007  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  33.88 
 
 		 229 aa  80.9  0.000000000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.14031 
 
 
-
 
NC_010001  Cphy_2121  two component transcriptional regulator  37.7 
 
 		 231 aa  80.9  0.000000000000009  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_3778  response regulator receiver domain-containing protein  36.36 
 
 		 124 aa  80.5  0.000000000000009  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_1986  two component transcriptional regulator  34.88 
 
 		 240 aa  80.9  0.000000000000009  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  34.96 
 
 		 236 aa  80.1  0.00000000000001  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
NC_007355  Mbar_A3109  response regulator receiver  30.89 
 
 		 285 aa  80.5  0.00000000000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0893452  normal  0.677049 
 
 
-
 
NC_007413  Ava_1777  metal dependent phosphohydrolase, HD region with response regulator receiver modulation  32.77 
 
 		 414 aa  80.1  0.00000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_1878  two component transcriptional regulator  34.4 
 
 		 242 aa  80.1  0.00000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.559477 
 
 
-
 
NC_011729  PCC7424_3637  two component transcriptional regulator, winged helix family  34.71 
 
 		 246 aa  80.5  0.00000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  37.29 
 
 		 236 aa  80.1  0.00000000000001  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal  1 
 
 
-
 
NC_007516  Syncc9605_2384  two component transcriptional regulator  36.07 
 
 		 259 aa  80.1  0.00000000000001  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0132  response regulator receiver protein  36.67 
 
 		 231 aa  80.1  0.00000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  35.29 
 
 		 230 aa  80.1  0.00000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_013525  Tter_1098  two component transcriptional regulator, winged helix family  35.25 
 
 		 228 aa  80.1  0.00000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009620  Smed_3762  putative adenylate/guanylate cyclase  31.76 
 
 		 520 aa  80.1  0.00000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.978534  normal  1 
 
 
-
 
NC_008025  Dgeo_0195  two component transcriptional regulator  35.83 
 
 		 222 aa  80.1  0.00000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.304768 
 
 
-
 
NC_008312  Tery_0954  two component transcriptional regulator  36.36 
 
 		 243 aa  80.1  0.00000000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.0817018 
 
 
-
 
NC_009674  Bcer98_1200  two component transcriptional regulator  36.67 
 
 		 238 aa  80.1  0.00000000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011761  AFE_0107  DNA-binding response regulator  35.71 
 
 		 236 aa  80.5  0.00000000000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_008820  P9303_26471  two-component response regulator  34.75 
 
 		 268 aa  80.1  0.00000000000001  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.889517 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>