More than 300 homologs were found in PanDaTox collection
for query gene Cphy_1986 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_1986  two component transcriptional regulator  100 
 
 
240 aa  479  1e-134  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0923  two-component response regulator; MrsR2 protein  52.79 
 
 
240 aa  262  3e-69  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.227452  n/a   
 
 
-
 
NC_006274  BCZK0906  response regulator  52.79 
 
 
240 aa  262  3e-69  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0844  two component transcriptional regulator  46.12 
 
 
235 aa  228  7e-59  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1023  two component transcriptional regulator  45.06 
 
 
233 aa  228  8e-59  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1173  DNA-binding response regulator  45.73 
 
 
234 aa  226  3e-58  Bacillus cereus B4264  Bacteria  normal  0.423617  n/a   
 
 
-
 
NC_011772  BCG9842_B4168  DNA-binding response regulator  45.73 
 
 
234 aa  224  8e-58  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1285  two component transcriptional regulator, winged helix family  46.52 
 
 
234 aa  223  2e-57  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.477652  n/a   
 
 
-
 
NC_011658  BCAH187_A1275  DNA-binding response regulator  46.29 
 
 
234 aa  222  3e-57  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1218  DNA-binding response regulator  45.26 
 
 
234 aa  221  9e-57  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1017  response regulator  45.85 
 
 
234 aa  221  9e-57  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0627963  n/a   
 
 
-
 
NC_011773  BCAH820_1198  DNA-binding response regulator  45.85 
 
 
234 aa  221  9e-57  Bacillus cereus AH820  Bacteria  n/a    normal  0.885409 
 
 
-
 
NC_006274  BCZK1018  response regulator  45.85 
 
 
234 aa  220  1.9999999999999999e-56  Bacillus cereus E33L  Bacteria  normal  0.54503  n/a   
 
 
-
 
NC_013441  Gbro_0997  response regulator receiver  44.64 
 
 
228 aa  220  1.9999999999999999e-56  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1040  DNA-binding response regulator  45.41 
 
 
234 aa  219  3.9999999999999997e-56  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1119  DNA-binding response regulator  45.41 
 
 
234 aa  219  3.9999999999999997e-56  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  48.68 
 
 
232 aa  218  5e-56  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  43.56 
 
 
226 aa  216  2.9999999999999998e-55  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_008726  Mvan_0831  two component transcriptional regulator  42.67 
 
 
228 aa  215  5.9999999999999996e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.310785  normal 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  46.7 
 
 
230 aa  213  1.9999999999999998e-54  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_008146  Mmcs_0661  two component transcriptional regulator  42.22 
 
 
228 aa  213  2.9999999999999995e-54  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0674  two component transcriptional regulator  42.22 
 
 
228 aa  213  2.9999999999999995e-54  Mycobacterium sp. KMS  Bacteria  normal  normal  0.850641 
 
 
-
 
NC_009077  Mjls_0654  two component transcriptional regulator  42.22 
 
 
228 aa  213  2.9999999999999995e-54  Mycobacterium sp. JLS  Bacteria  normal  normal  0.682961 
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  43.11 
 
 
230 aa  212  4.9999999999999996e-54  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1554  two component transcriptional regulator, winged helix family  44.25 
 
 
229 aa  211  5.999999999999999e-54  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.00709514 
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  40.44 
 
 
228 aa  211  5.999999999999999e-54  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10499  two component system sensor transduction protein regX3  42.22 
 
 
227 aa  211  9e-54  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.46064e-66  normal 
 
 
-
 
NC_009338  Mflv_0082  two component transcriptional regulator  41.78 
 
 
228 aa  211  9e-54  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  43.11 
 
 
229 aa  211  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1546  two component transcriptional regulator, winged helix family  43.72 
 
 
237 aa  210  2e-53  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000115937  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  43.11 
 
 
229 aa  209  2e-53  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  46.7 
 
 
237 aa  207  9e-53  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  41.78 
 
 
226 aa  206  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2903  two component transcriptional regulator, winged helix family  44.05 
 
 
234 aa  206  2e-52  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1673  two component transcriptional regulator, winged helix family  44.54 
 
 
233 aa  206  3e-52  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  46.93 
 
 
235 aa  205  5e-52  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  42.22 
 
 
226 aa  205  5e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  45.41 
 
 
236 aa  205  6e-52  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  46.93 
 
 
235 aa  204  9e-52  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  46.93 
 
 
235 aa  204  1e-51  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  46.93 
 
 
235 aa  204  1e-51  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  46.93 
 
 
235 aa  204  1e-51  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  46.93 
 
 
235 aa  204  1e-51  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_005957  BT9727_5147  response regulator  46.93 
 
 
235 aa  204  1e-51  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  46.93 
 
 
235 aa  204  1e-51  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_006274  BCZK5163  response regulator  46.93 
 
 
235 aa  204  1e-51  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  46.93 
 
 
235 aa  204  1e-51  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_009380  Strop_0337  two component transcriptional regulator  42.22 
 
 
227 aa  204  1e-51  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  46.93 
 
 
235 aa  204  1e-51  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  40.89 
 
 
225 aa  204  1e-51  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0654  two component transcriptional regulator, winged helix family  41.33 
 
 
229 aa  202  3e-51  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.200991  n/a   
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  41.33 
 
 
226 aa  202  4e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  41.33 
 
 
231 aa  202  5e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  43.81 
 
 
232 aa  202  5e-51  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1714  two component transcriptional regulator, winged helix family  41.74 
 
 
234 aa  202  5e-51  Clostridium cellulolyticum H10  Bacteria  normal  0.233786  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  44.93 
 
 
223 aa  201  6e-51  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  40 
 
 
230 aa  201  6e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.683455 
 
 
-
 
NC_011830  Dhaf_0287  two component transcriptional regulator, winged helix family  42.04 
 
 
229 aa  201  6e-51  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00220806  n/a   
 
 
-
 
NC_010320  Teth514_1155  two component transcriptional regulator  44.49 
 
 
231 aa  201  7e-51  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000000430064  n/a   
 
 
-
 
NC_009632  SaurJH1_0018  response regulator receiver  45.13 
 
 
233 aa  201  9e-51  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0580  two component transcriptional regulator, winged helix family  39.56 
 
 
226 aa  201  9e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009487  SaurJH9_0018  two component transcriptional regulator  45.13 
 
 
233 aa  201  9e-51  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.70243  n/a   
 
 
-
 
NC_002976  SERP2534  DNA-binding response regulator YycF  45.13 
 
 
233 aa  201  9.999999999999999e-51  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0404  two component transcriptional regulator  42.22 
 
 
227 aa  201  9.999999999999999e-51  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00316128 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  43.11 
 
 
229 aa  201  9.999999999999999e-51  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_013235  Namu_4929  two component transcriptional regulator, winged helix family  40.44 
 
 
226 aa  200  9.999999999999999e-51  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1847  two component transcriptional regulator  44.1 
 
 
234 aa  200  9.999999999999999e-51  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00000121968  n/a   
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  40.89 
 
 
226 aa  200  1.9999999999999998e-50  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2867  two component transcriptional regulator, winged helix family  41.74 
 
 
233 aa  199  1.9999999999999998e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  39.38 
 
 
229 aa  199  3.9999999999999996e-50  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0724  two component transcriptional regulator  40.89 
 
 
226 aa  198  5e-50  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  43.42 
 
 
235 aa  198  5e-50  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_4687  two component transcriptional regulator, winged helix family  41.59 
 
 
230 aa  198  7e-50  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000000280381  n/a   
 
 
-
 
NC_013721  HMPREF0424_0155  response regulator receiver domain protein  41.53 
 
 
233 aa  198  7.999999999999999e-50  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.37446 
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  42.54 
 
 
234 aa  197  1.0000000000000001e-49  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  42.54 
 
 
234 aa  197  1.0000000000000001e-49  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  41.56 
 
 
228 aa  197  1.0000000000000001e-49  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  40.62 
 
 
230 aa  196  2.0000000000000003e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  38.79 
 
 
231 aa  196  2.0000000000000003e-49  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  43.04 
 
 
236 aa  196  2.0000000000000003e-49  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_009523  RoseRS_4483  two component transcriptional regulator  41.59 
 
 
226 aa  197  2.0000000000000003e-49  Roseiflexus sp. RS-1  Bacteria  normal  0.759432  decreased coverage  0.000734691 
 
 
-
 
NC_009674  Bcer98_0264  two component transcriptional regulator  44.3 
 
 
238 aa  196  2.0000000000000003e-49  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.392693  n/a   
 
 
-
 
NC_011830  Dhaf_3869  two component transcriptional regulator, winged helix family  40.53 
 
 
239 aa  197  2.0000000000000003e-49  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0850  two component transcriptional regulator, winged helix family  41.33 
 
 
226 aa  196  2.0000000000000003e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  40.97 
 
 
231 aa  196  2.0000000000000003e-49  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  41.2 
 
 
228 aa  197  2.0000000000000003e-49  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_013552  DhcVS_143  DNA-binding response regulator, two-component system, OmpR family  38.7 
 
 
256 aa  196  3e-49  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  38.86 
 
 
228 aa  196  3e-49  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_007777  Francci3_0471  two component transcriptional regulator  41.33 
 
 
226 aa  196  3e-49  Frankia sp. CcI3  Bacteria  normal  normal  0.734397 
 
 
-
 
NC_010320  Teth514_0766  two component transcriptional regulator  43.81 
 
 
231 aa  196  3e-49  Thermoanaerobacter sp. X514  Bacteria  normal  0.585906  n/a   
 
 
-
 
NC_013204  Elen_1009  two component transcriptional regulator, winged helix family  40.79 
 
 
235 aa  196  3e-49  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0833578 
 
 
-
 
NC_011831  Cagg_1777  two component transcriptional regulator, winged helix family  41.59 
 
 
226 aa  196  3e-49  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0722021  normal  0.591414 
 
 
-
 
NC_010184  BcerKBAB4_0266  two component transcriptional regulator  43.86 
 
 
237 aa  196  4.0000000000000005e-49  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.262207  n/a   
 
 
-
 
NC_005957  BT9727_0255  DNA-binding response regulator  44.3 
 
 
237 aa  195  4.0000000000000005e-49  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  44.49 
 
 
234 aa  196  4.0000000000000005e-49  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  44.21 
 
 
239 aa  195  4.0000000000000005e-49  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_013172  Bfae_09290  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  41.33 
 
 
229 aa  195  4.0000000000000005e-49  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  44.21 
 
 
239 aa  195  4.0000000000000005e-49  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_007530  GBAA_0287  DNA-binding response regulator  44.74 
 
 
237 aa  195  5.000000000000001e-49  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.42222  n/a   
 
 
-
 
NC_011773  BCAH820_0317  DNA-binding response regulator  44.74 
 
 
237 aa  195  5.000000000000001e-49  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>