| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4871 |
|---|
| Symbol | |
|---|
| ID | 6113861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5380734 |
|---|
| End bp | 5381414 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641624683 |
|---|
| Product | DNA-binding response regulator CreB |
|---|
| Protein accession | YP_001751716 |
|---|
| Protein GI | 170724028 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.608103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.305164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCACA TTCTCATCGT CGAAGACGAA GCCGCCATCG CCGATACCCT GATCTACGCC
CTGCAGGCCG AGGGCCACAG CACCGCGTGG GTGACCCTGG GCACCGCGGC CCTGGAGCAG
CAGCGCCAGC GGCCGGCCGA CCTGGTGATC CTCGACATCG GGCTGCCCGA CATCAGTGGT
TTTGATACCT GCCGCCAGCT ACGCCGCTTC AGCGAGGTGC CGGTGATGTT CCTCAGCGCC
CGTGACGGTG AAATCGACCG GGTTGTAGGC CTGGAAATAG GCGCCGACGA CTACGTGGTC
AAACCCTTCA GCCCGCGGGA GGTGGCGGCC CGGGTGCGGG CGATCCTCAA GCGCATGGCG
CCACGGGTCG AGCCACCTGC CGAAACGGCA CTGTTCCAGC TCGACACCCT GCGCATGCTG
ATCAGCTACC GCAGCCAGCC GCTGAGCCTG ACCCGCCACG AATTCCGTTT GCTGCAATGC
CTGCTGACGC AACCGCAGCG TGTATTCAGC CGCGAACAGT TGCTCGATGC GCTGGGAGTG
GCCTCCGATG TGGGTTACGA GCGCACCATC GACAGCCATA TCAAGAGCCT GCGCGCCAAG
CTGCGGCAGG TGGCTGCCCA TGCCGAACCG ATCCAGACCC ATCGTGGGCT GGGTTACAGC
TACAGCCCGG AACACGCCTG A
|
|---|
| Protein sequence | MPHILIVEDE AAIADTLIYA LQAEGHSTAW VTLGTAALEQ QRQRPADLVI LDIGLPDISG
FDTCRQLRRF SEVPVMFLSA RDGEIDRVVG LEIGADDYVV KPFSPREVAA RVRAILKRMA
PRVEPPAETA LFQLDTLRML ISYRSQPLSL TRHEFRLLQC LLTQPQRVFS REQLLDALGV
ASDVGYERTI DSHIKSLRAK LRQVAAHAEP IQTHRGLGYS YSPEHA
|
|---|
| |