Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2896 |
Symbol | |
ID | 3627791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3712494 |
End bp | 3713003 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637701744 |
Product | transcriptional regulator |
Protein accession | YP_306374 |
Protein GI | 73670359 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00223348 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAATA AAAATCTTGA TCATGAGATT TTGAAATTAA TTGAAGCACA ACCTGAAATA AGTGAGAGGG AGATTGCCTC CCGTCTTTCA GTTTCAGAAG AACTGGTAAA AACCCGAATT GCAAATCTTA AGGACACGCG GCAGAAAATC CTGATTATGG GAGATGGAAG CAATGCCCTA AGTGTTAAGG CGACACTTGA AGCTGAAAAT TATAACGTTG TCGAAATCCC TGGTGGTTTT TCCTCACTTG AAGCCGTAAC AGCTGAAAAA CCCGACCTTG TATTGTTGGA TACCGGGCTT GCAGACCCTG AAGGTTTCAA AATCTGTAAG CAGCTTAGAA CAAGTTCAAG GTACTGGTGG ATACCGGTTA TGGTGCTCAG TGAAAAAGGA GAGGTAAAAA ACAGGATTGA GGCTTTTGAA TCGGGTGTGG ATGACTATGT TACTACGCCT TTTAACCCTG TGGAACTGCG AGTCAGGGTG GGAATGATCT TGAAACGTAC TTATTTCTAA
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Protein sequence | MNNKNLDHEI LKLIEAQPEI SEREIASRLS VSEELVKTRI ANLKDTRQKI LIMGDGSNAL SVKATLEAEN YNVVEIPGGF SSLEAVTAEK PDLVLLDTGL ADPEGFKICK QLRTSSRYWW IPVMVLSEKG EVKNRIEAFE SGVDDYVTTP FNPVELRVRV GMILKRTYF
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