Gene Mbar_A2896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2896 
Symbol 
ID3627791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3712494 
End bp3713003 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content42% 
IMG OID637701744 
Producttranscriptional regulator 
Protein accessionYP_306374 
Protein GI73670359 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00223348 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAATA AAAATCTTGA TCATGAGATT TTGAAATTAA TTGAAGCACA ACCTGAAATA 
AGTGAGAGGG AGATTGCCTC CCGTCTTTCA GTTTCAGAAG AACTGGTAAA AACCCGAATT
GCAAATCTTA AGGACACGCG GCAGAAAATC CTGATTATGG GAGATGGAAG CAATGCCCTA
AGTGTTAAGG CGACACTTGA AGCTGAAAAT TATAACGTTG TCGAAATCCC TGGTGGTTTT
TCCTCACTTG AAGCCGTAAC AGCTGAAAAA CCCGACCTTG TATTGTTGGA TACCGGGCTT
GCAGACCCTG AAGGTTTCAA AATCTGTAAG CAGCTTAGAA CAAGTTCAAG GTACTGGTGG
ATACCGGTTA TGGTGCTCAG TGAAAAAGGA GAGGTAAAAA ACAGGATTGA GGCTTTTGAA
TCGGGTGTGG ATGACTATGT TACTACGCCT TTTAACCCTG TGGAACTGCG AGTCAGGGTG
GGAATGATCT TGAAACGTAC TTATTTCTAA
 
Protein sequence
MNNKNLDHEI LKLIEAQPEI SEREIASRLS VSEELVKTRI ANLKDTRQKI LIMGDGSNAL 
SVKATLEAEN YNVVEIPGGF SSLEAVTAEK PDLVLLDTGL ADPEGFKICK QLRTSSRYWW
IPVMVLSEKG EVKNRIEAFE SGVDDYVTTP FNPVELRVRV GMILKRTYF