Gene Dtox_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0488 
Symbol 
ID8427423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp499724 
End bp500431 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content41% 
IMG OID645032859 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003190037 
Protein GI258513815 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00220414 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCTTT TGGCTACAAA TATTTTGATC GCTGATGATG AACAAGCAAT TGCCGATTTG 
GTAGCAGTTT ATCTGGAAAA TGAGAATTAT CATGTCTTTA AATTTTATAA CGGTAAGGAT
ACTCTTAACT GCGTTGAAAA TGAAAGATTG GATCTCGCCA TTTTGGATGT CATGCTTCCG
GATATGGACG GCTTTTCGAT CTGTCAGCAA ATCCGGGAAA AGCATAATTT TCCGGTTATT
ATGCTGACAG CCAAAGAAGA AGAAATCGAT AAGATTACCG GGCTGACATT AGGTGCGGAC
GACTATATCA CTAAACCGTT CCGCCCTTTG GAACTTATTG CCCGTGTAAA GGCGCAGCTC
CGGAGATTTA CCAAATATAA TTCTGCGGAG CCAAACCAGG AAGAACACTT GATTGCCTTT
TCCGGCTTGG TATTGGACAA GAAGACCCAT GAATGTACGC TGAATGAAAA AAGGCTATCT
CTCACTCCTA CAGAGTTTTC TATTCTTTGG GTCCTTTGTT CCAATCGCGG ACGGGTGGTC
AGTTCGGAAG AATTGTTCCA TGAGGTATGG GGAGATAAGT ATTTCACTAA CAGCAATAAT
ACTGTAATGG TTCATATCAG GCATTTAAGG GAAAAAATGC ACGACAGCGC GGAACATCCT
AAATATATCA AAACGGTATG GGGAGTTGGC TATAAAATTG AAAAGTGA
 
Protein sequence
MMLLATNILI ADDEQAIADL VAVYLENENY HVFKFYNGKD TLNCVENERL DLAILDVMLP 
DMDGFSICQQ IREKHNFPVI MLTAKEEEID KITGLTLGAD DYITKPFRPL ELIARVKAQL
RRFTKYNSAE PNQEEHLIAF SGLVLDKKTH ECTLNEKRLS LTPTEFSILW VLCSNRGRVV
SSEELFHEVW GDKYFTNSNN TVMVHIRHLR EKMHDSAEHP KYIKTVWGVG YKIEK