More than 300 homologs were found in PanDaTox collection
for query gene M446_3901 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_3901  cache type 2 domain-containing protein  100 
 
 
343 aa  680    Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.98 
 
 
564 aa  203  4e-51  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_010505  Mrad2831_1766  methyl-accepting chemotaxis sensory transducer  48.85 
 
 
575 aa  197  2.0000000000000003e-49  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2874  methyl-accepting chemotaxis sensory transducer  43.78 
 
 
563 aa  187  2e-46  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.872696  normal  0.485865 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  47.42 
 
 
541 aa  181  2e-44  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.77 
 
 
566 aa  178  1e-43  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_009636  Smed_1613  methyl-accepting chemotaxis sensory transducer  41.8 
 
 
603 aa  177  3e-43  Sinorhizobium medicae WSM419  Bacteria  normal  0.183078  normal  0.160096 
 
 
-
 
NC_007298  Daro_2728  chemotaxis sensory transducer  41.81 
 
 
544 aa  173  2.9999999999999996e-42  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00837045  normal  0.306222 
 
 
-
 
NC_011891  A2cp1_3858  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.26 
 
 
526 aa  173  3.9999999999999995e-42  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  43.33 
 
 
549 aa  171  2e-41  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  52.99 
 
 
533 aa  170  3e-41  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  41.01 
 
 
556 aa  170  3e-41  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  37.85 
 
 
563 aa  170  3e-41  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_007958  RPD_3836  Cache, type 2  39.02 
 
 
661 aa  169  4e-41  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.337162  normal 
 
 
-
 
NC_011145  AnaeK_3775  methyl-accepting chemotaxis sensory transducer  46.7 
 
 
526 aa  169  7e-41  Anaeromyxobacter sp. K  Bacteria  normal  0.268134  n/a   
 
 
-
 
NC_007760  Adeh_3718  methyl-accepting chemotaxis sensory transducer  43.36 
 
 
526 aa  169  8e-41  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.734846  n/a   
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
566 aa  168  1e-40  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  39.27 
 
 
664 aa  167  2.9999999999999998e-40  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
566 aa  166  5e-40  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2464  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.96 
 
 
605 aa  165  9e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2392  methyl-accepting chemotaxis sensory transducer  33.2 
 
 
787 aa  165  1.0000000000000001e-39  Magnetococcus sp. MC-1  Bacteria  normal  0.467356  normal  0.0918963 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  35.85 
 
 
548 aa  162  7e-39  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_008576  Mmc1_2492  methyl-accepting chemotaxis sensory transducer  33.72 
 
 
787 aa  162  8.000000000000001e-39  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000288595  normal  0.31948 
 
 
-
 
NC_011369  Rleg2_2181  methyl-accepting chemotaxis sensory transducer  45 
 
 
606 aa  160  4e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.440189  normal  0.953277 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  40.83 
 
 
544 aa  159  5e-38  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1387  methyl-accepting chemotaxis sensory transducer  40.15 
 
 
615 aa  159  5e-38  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  51.03 
 
 
678 aa  159  1e-37  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  39.15 
 
 
563 aa  157  2e-37  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_4018  methyl-accepting chemotaxis sensory transducer  37.27 
 
 
713 aa  156  6e-37  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000208845  n/a   
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  38.94 
 
 
569 aa  155  9e-37  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  40.42 
 
 
544 aa  154  2e-36  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_009485  BBta_6950  putative methyl-accepting chemotaxis receptor/sensory transducer  40.45 
 
 
661 aa  154  2e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  41.84 
 
 
544 aa  152  5.9999999999999996e-36  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  38.41 
 
 
544 aa  152  8e-36  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  40.19 
 
 
544 aa  152  1e-35  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_010172  Mext_1901  integrase catalytic region  84.34 
 
 
157 aa  150  2e-35  Methylobacterium extorquens PA1  Bacteria  normal  0.455468  normal 
 
 
-
 
NC_008576  Mmc1_3547  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
676 aa  150  3e-35  Magnetococcus sp. MC-1  Bacteria  normal  0.126617  normal 
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  40 
 
 
543 aa  149  6e-35  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_009483  Gura_3308  diguanylate cyclase  37.44 
 
 
603 aa  149  1.0000000000000001e-34  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000660005  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  31.82 
 
 
585 aa  147  2.0000000000000003e-34  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  46.76 
 
 
543 aa  147  3e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  36.14 
 
 
567 aa  146  5e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  35.66 
 
 
540 aa  145  8.000000000000001e-34  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  31.78 
 
 
715 aa  143  3e-33  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  33.06 
 
 
587 aa  144  3e-33  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_011757  Mchl_1112  Integrase catalytic region  87.67 
 
 
260 aa  143  3e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.323234 
 
 
-
 
NC_011758  Mchl_5526  Integrase catalytic region  87.67 
 
 
260 aa  143  3e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.109818 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.77 
 
 
546 aa  144  3e-33  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007925  RPC_1253  methyl-accepting chemotaxis sensory transducer  35.46 
 
 
567 aa  142  7e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.010155 
 
 
-
 
NC_009483  Gura_2989  methyl-accepting chemotaxis sensory transducer  37.7 
 
 
1093 aa  142  9.999999999999999e-33  Geobacter uraniireducens Rf4  Bacteria  normal  0.653084  n/a   
 
 
-
 
NC_012034  Athe_1130  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.54 
 
 
571 aa  140  1.9999999999999998e-32  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2847  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.4 
 
 
1089 aa  140  1.9999999999999998e-32  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000851175  n/a   
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  34.51 
 
 
545 aa  140  3e-32  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.49 
 
 
584 aa  139  4.999999999999999e-32  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_008576  Mmc1_2220  diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)  37.88 
 
 
971 aa  139  6e-32  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.00060546  normal  0.0976665 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
546 aa  139  7.999999999999999e-32  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0777  methyl-accepting chemotaxis sensory transducer  28.63 
 
 
712 aa  139  1e-31  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0077  histidine kinase  39.43 
 
 
661 aa  135  9.999999999999999e-31  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.131853 
 
 
-
 
NC_007643  Rru_A2366  methyl-accepting chemotaxis sensory transducer  34.72 
 
 
560 aa  135  9.999999999999999e-31  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196109  n/a   
 
 
-
 
NC_010814  Glov_1840  integral membrane sensor hybrid histidine kinase  37.62 
 
 
641 aa  132  9e-30  Geobacter lovleyi SZ  Bacteria  normal  0.870294  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  34.55 
 
 
549 aa  132  1.0000000000000001e-29  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
584 aa  132  1.0000000000000001e-29  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3240  methyl-accepting chemotaxis sensory transducer  34.36 
 
 
668 aa  132  1.0000000000000001e-29  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000648214  normal  0.034513 
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  31.02 
 
 
540 aa  128  1.0000000000000001e-28  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_010511  M446_2738  methyl-accepting chemotaxis sensory transducer  35.48 
 
 
562 aa  128  1.0000000000000001e-28  Methylobacterium sp. 4-46  Bacteria  normal  0.809654  normal  0.020868 
 
 
-
 
NC_012918  GM21_1366  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.94 
 
 
1088 aa  127  2.0000000000000002e-28  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000517956 
 
 
-
 
NC_007643  Rru_A0632  chemotaxis sensory transducer  35.09 
 
 
736 aa  125  1e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.180969  n/a   
 
 
-
 
NC_010505  Mrad2831_1828  methyl-accepting chemotaxis sensory transducer  35 
 
 
579 aa  122  7e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0132835 
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  35.15 
 
 
513 aa  121  9.999999999999999e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  34.2 
 
 
561 aa  120  3e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2947  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
749 aa  120  3e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  0.732257  normal 
 
 
-
 
NC_003296  RSp1628  ISRSO16-transposase ORFB protein  43.57 
 
 
269 aa  119  9e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  32.82 
 
 
559 aa  117  1.9999999999999998e-25  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  34.16 
 
 
513 aa  117  1.9999999999999998e-25  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  30.9 
 
 
515 aa  117  1.9999999999999998e-25  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_013730  Slin_0124  Integrase catalytic region  60.47 
 
 
272 aa  117  3e-25  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.345936 
 
 
-
 
NC_013730  Slin_2277  Integrase catalytic region  60.47 
 
 
272 aa  117  3e-25  Spirosoma linguale DSM 74  Bacteria  decreased coverage  0.0000868543  normal  0.0420034 
 
 
-
 
NC_013730  Slin_2286  Integrase catalytic region  60.47 
 
 
272 aa  117  3e-25  Spirosoma linguale DSM 74  Bacteria  normal  0.102637  hitchhiker  0.00753929 
 
 
-
 
NC_013730  Slin_3838  Integrase catalytic region  60.47 
 
 
272 aa  117  3e-25  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_6171  Integrase catalytic region  60.47 
 
 
272 aa  117  3e-25  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  32.52 
 
 
519 aa  116  3.9999999999999997e-25  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1432  Integrase catalytic region  68 
 
 
269 aa  117  3.9999999999999997e-25  Geobacter lovleyi SZ  Bacteria  normal  0.868681  n/a   
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  34.67 
 
 
573 aa  115  6.9999999999999995e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  36.05 
 
 
569 aa  116  6.9999999999999995e-25  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1693  integrase catalytic subunit  61.8 
 
 
167 aa  115  8.999999999999998e-25  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.271458  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  31.9 
 
 
585 aa  114  2.0000000000000002e-24  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  33.9 
 
 
570 aa  114  2.0000000000000002e-24  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_007519  Dde_2734  methyl-accepting chemotaxis sensory transducer  34.43 
 
 
751 aa  115  2.0000000000000002e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  35.68 
 
 
513 aa  113  4.0000000000000004e-24  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_009616  Tmel_1579  methyl-accepting chemotaxis sensory transducer  30.29 
 
 
565 aa  113  4.0000000000000004e-24  Thermosipho melanesiensis BI429  Bacteria  normal  0.327894  n/a   
 
 
-
 
NC_003296  RSp0558  ISRSO16-transposase ORFB protein  63.41 
 
 
280 aa  113  6e-24  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.269801 
 
 
-
 
NC_011662  Tmz1t_1371  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.62 
 
 
544 aa  112  6e-24  Thauera sp. MZ1T  Bacteria  normal  0.116754  n/a   
 
 
-
 
NC_010510  Mrad2831_6105  integrase catalytic region  66.67 
 
 
279 aa  112  9e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2633  integrase catalytic region  66.67 
 
 
279 aa  112  9e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.348098  normal 
 
 
-
 
NC_010505  Mrad2831_4739  integrase catalytic region  66.67 
 
 
279 aa  112  9e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2926  integrase catalytic region  66.67 
 
 
279 aa  112  9e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0441  integrase catalytic region  66.67 
 
 
279 aa  112  9e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.110873  normal 
 
 
-
 
NC_011981  Avi_7504  IS3 family transposase  47.32 
 
 
285 aa  111  2.0000000000000002e-23  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3989  IS3 family transposase  50.96 
 
 
165 aa  111  2.0000000000000002e-23  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1798  methyl-accepting chemotaxis sensory transducer  35.65 
 
 
615 aa  111  2.0000000000000002e-23  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.371991  normal 
 
 
-
 
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