| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1628 |
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| Symbol | tISRso16b |
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| ID | 1223940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 2048587 |
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| End bp | 2049396 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637241491 |
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| Product | ISRSO16-transposase ORFB protein |
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| Protein accession | NP_523187 |
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| Protein GI | 17549847 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCAAG CAGGGGATCA GCGAATTCGG AGCTACGCCG GATGCGGCAA CTCGAGGAAG
AGAAAGCGAC TCGTCGGCAT TGCTTGCACG CATCAAAGAG ATTGCGGCCA CTACGGCTAT
CACCGTGTGC ACGTGATGCA GCAGCGGGAG AGCTGGAAAG ACAATCACAA ACGCGTCTAT
CACCTGTATC GAGCGGAAGG CTTGTCGCTG CGGCATAAAC GCCCCAAGTG CAACAAGTCG
GCGCGGCTAC GCCAGCCCAA GAGCATTGTC ATGGGCATCA ACGAAATCTG GAGCATGGAC
TTTGTATCCG ACGCGTTGCT CGACGGCCAG CGCTTGCGCG CGTTGACCGT GGTGGACAAC
TACACCAGGG AAAGCCTGGC CATCGAAGTC GGCCAAAGCC TGAAGGGGAA AGACGTTGTG
CGAGTGCTCG ATGCCGTTGT TGCCCAGCAT GGCACGCCTC AAACCATCAA GGTGGACAAT
GGCACCGAGT TCATCTCGAA GGCGATGGAC CGATGGGCAT ACGAGCACGG CGTCGAGCTC
GACTTTAGTC GGCCAGGCAC GCCCACCGAC AATGCCAAGG TGGAAAGCTT CAACGGGCGG
TTCCGGCAGG AATGCCTGAA TGAGCACTGG TTTTTGTCCC TGGAGGATGC TCAGAGCAAA
ATCGCCGACT GGCGGCGGCA CTATAACGAA AGTCGCCCCC ACTCTGCATT GCAGTGGGCG
ACACCCGACG AATTCGCCCG TCAGGCAAGG AAGAGCGCCT CGATGGACGA TTCAACGACG
CCGGAAATCT CTACTTCTGG GCGTTACTAA
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| Protein sequence | MPQAGDQRIR SYAGCGNSRK RKRLVGIACT HQRDCGHYGY HRVHVMQQRE SWKDNHKRVY
HLYRAEGLSL RHKRPKCNKS ARLRQPKSIV MGINEIWSMD FVSDALLDGQ RLRALTVVDN
YTRESLAIEV GQSLKGKDVV RVLDAVVAQH GTPQTIKVDN GTEFISKAMD RWAYEHGVEL
DFSRPGTPTD NAKVESFNGR FRQECLNEHW FLSLEDAQSK IADWRRHYNE SRPHSALQWA
TPDEFARQAR KSASMDDSTT PEISTSGRY
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