Gene Avi_3989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3989 
Symbol 
ID7387327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp3360864 
End bp3361361 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content55% 
IMG OID643652717 
ProductIS3 family transposase 
Protein accessionYP_002550892 
Protein GI222149935 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAACA CTCGCGTTAA ATCGGCAATC GAAGCCACTT CGTCATTACT TAGTCCTTGG 
CAATCCCTTG AAATCACGCT CAAGCAGTTC TGGAGGGATT GCGATTTTAG TCCAGTGAAC 
CGCTTCAGCT ATAAAGGGGA AGACGTCGTG CAGACCCTCG AACGCGTATG CCGGCAGGTC 
GGTTACCCGG CCACCATTCG GGTGGACAAC GGCAGCGAAT TCATCTCTCG TGACCTCGAT 
CTCTGGGCCT ATCATAGAGG CGTCGTGCTT GACTTCTCGC GGCCGGGCAA GCCGACGGAC 
AACAGCTACA TCGAGAGTTT TAATGGCAAG TTCCGGGCAG AGTGCCTGAA CGCCCACTGG 
TTTATGAGCC TTGACGACGC AAGGGCAAAG ATGGAGGATT GGCGTAGAGA CTATAACGAG 
TTCCGGCCAC ACAGCGCCAT CGGCAACAAG GTGCCGATTT CGCTTATGAA CGGCTCACCG 
GCACCACCGC CGACCTGA
 
Protein sequence
MFNTRVKSAI EATSSLLSPW QSLEITLKQF WRDCDFSPVN RFSYKGEDVV QTLERVCRQV 
GYPATIRVDN GSEFISRDLD LWAYHRGVVL DFSRPGKPTD NSYIESFNGK FRAECLNAHW 
FMSLDDARAK MEDWRRDYNE FRPHSAIGNK VPISLMNGSP APPPT