| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7504 |
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| Symbol | orfB |
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| ID | 7380050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 454438 |
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| End bp | 455295 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641532 |
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| Product | IS3 family transposase |
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| Protein accession | YP_002539829 |
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| Protein GI | 222102790 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGG ACATCCTCAT GACAAACGCG GCTCAACCAT CCGTAAAATC CACCCCCTAC
TGGTGGGATG GCTGCACGTT TCCAACCTTG TCGACCAAGC CGGTGAGCGC CACCTGTGAC
GTCGCTATTG TTGGCGGTGG CTACACCGGT CTCTCAGCCG CCATCGAGCT TGCGCGGGCC
GGCCTGCATG TTCAGCTGTT TGATCGGACA TCGCTTGGGC AAGCCGCATC CAGCCGCAAC
GGCTGGGTGG TGAATCCGAA GAGAAACTAT CGTCTTTACA AGGAGATGGA CCTGCAACTG
CGCAACAAGG TGCCAAAACG GCGCGTCAAA GCAAAGCTGC GATCGGACCG CACCGCAGCC
ACCCGTTCGA ACGACGTCTG GGCCATGGAT TTCGTGCATG ACCAACTGGC CACAGGTCGC
AAGATCAGGG TTCTCACGGT TGTCGATACC TTCTCGCGCT TCTCTCCGGC GGTAGATGCC
CGCTTCAGCT ATAAAGGGGA AGACGTCGTG CAGACCCTCG AACGCGTATG CCGGCAGGTC
GGTTACCCGG CCACCATTCG GGTGGACAAC GGCAGCGAAT TCATCTCTCG TGACCTCGAT
CTCTGGGCCT ATCATAGAGG CGTCGTGCTT GACTTCTCGC GGCCGGGCAA GCCGACGGAC
AACAGCTACA TCGAGAGTTT TAATGGCAAG TTCCGGGCAG AGTGCCTGAA CGCCCACTGG
TTTATGAGCC TTGACGACGC AAGGGCAAAG ATGGAGGATT GGCGTAGAGA CTATAACGAG
TTCCGGCCAC ACAGCGCGAT CGGCAACAAG GTGCCGATTT CGCTTATGAA CGGCTCATCG
GCACCCACGC CAACCTGA
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| Protein sequence | MKRDILMTNA AQPSVKSTPY WWDGCTFPTL STKPVSATCD VAIVGGGYTG LSAAIELARA
GLHVQLFDRT SLGQAASSRN GWVVNPKRNY RLYKEMDLQL RNKVPKRRVK AKLRSDRTAA
TRSNDVWAMD FVHDQLATGR KIRVLTVVDT FSRFSPAVDA RFSYKGEDVV QTLERVCRQV
GYPATIRVDN GSEFISRDLD LWAYHRGVVL DFSRPGKPTD NSYIESFNGK FRAECLNAHW
FMSLDDARAK MEDWRRDYNE FRPHSAIGNK VPISLMNGSS APTPT
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