Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Glov_1840 |
Symbol | |
ID | 6366120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter lovleyi SZ |
Kingdom | Bacteria |
Replicon accession | NC_010814 |
Strand | + |
Start bp | 1963109 |
End bp | 1965034 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642677245 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001952076 |
Protein GI | 189424899 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.870294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGTA GTTATTGGCC CCACAGCTGG AACCTGTTGA CCAAGATTGT AGCTGTCAAT CTGGTGGTCC TCTTTGTCGC GTTTCTCGCT CTGATGTTCT ATGTGCTCCC CCTCTATGAA GACAAGTTGC AGCAGCAGCG CAAGCAGTAT ATTGCCGAAC TGGTTGATAT GGCCACCGGC GTGGTTGAAA ACTGCCACCA GCAGGAGTTG CAGGGACGTC AGACCACCTC TGAGGCGCAA CAGTCAGCAT TGGCGACACT CAGGGTGATG TCCCGGGACA ACGGCTATTT CTGGATTCAT GACATGCAGT TAAAGATGAT CATGCATCCC TATGCCACCC ATCTTGATAA CCACAATCTT GCAGGTTATG CGGACCCGAA CGGCAAGAAG CTGTTTGTGG AGATGAACCG GCTGGTGGCG GCGTCCGGCA AGGGCTATCT GGAGTACTAT TGGCCGAAGC CCGGCCATGA CCAGGCAATT TCAAAGATCT CTTTTGTAAA GCTTTTTGTC CCCTGGGGCT GGGTGATCGG TAGTGGGATG TACCTGGATG ATATCTCTGA GGAGGTATCA TCGCTCAGGC ATAAGGTCTA TCTCATTGTT GGTCTTGTGC TGGTCTTGAT AACTGCGTTT TCATTGATTG TTGCTGTCCG GATCAAGAAG CCGCTGCAGC AGGCACTGGA ACTGCTGCAG GAGATACCTG AACAGTACCG GCCTGTCCAG AGCGTGACTG CACTGGATGA ATCCAACCGG CTGTTGCGGG CCATGGTTAA TCTGGTAACC GCTCTGAAGG CTGCCAAAGA ACAGGCAGAG GCAGCCAGTT CTGCCAAGGG GGCATTCCTG GCCCAGATGA GCCATGAGAT CCGGACACCG ATGAATGCGA TCAGCGGACT GACCGAGCTT GCCCTGGATC AGGCTCCTTC CGCGCAACAA CGGGAGCTGC TTGAAGGTAT CAGTCATGCC GCAAACCATC TCTTGAGCCT GATTAACCAG GTGCTTGATT TCTCAAAACT GGAGGCGGGA ATCGTTGAGC TGGAACAGAT TCCTTTTAAT CTGCGACAGA CACTGACAGC AACACTGCTG CCATTCTCGG TGCGGGTCCG TTCAAAGGGA GTCAGATTTG AAACTGTCCT GGCCGATAAC CTGCCGACCA GGGTGATCGG TGACCCGACC AGATTGCGTC AGGTACTGGT TAATCTGGTG GGGAATGCGG TCAAGTTTAC CCGGCAGGGG TGTATTGAGA TCGACGTGGA AAAAGGTGAG CAGACGGGCA ACCACTGTGA GCTGCGCATC ATGGTCAGAG ACACCGGGAT CGGTATCCCG CAGGAGAAGA TTGCACAGAT CTTTGCCCCT TACAGCCAGG CTGCCGCCTC AACGACCCGC GAATTCGGCG GCACCGGCCT GGGACTTTCG ATTGTCAAGC AGTTGCTTGA GGTGATGCAG GGAACGATTA CGGTTGAAAG CCAGCCCGGA GCAGGAACCT GCTTCTCGGT GTCTGTTCCG GTTGAGATTG CAGGGCCTGA TACGCTGTCC GGCTCGGCAG ATCTCCAGGG CGTTCCTGCC CAGCGGATTT TACTGGCAGA GGATAATGAA ATCAACCGCA TGATGCTGGC CAGACTGCTT GAAAAAACAG GCCATTCGGT TGACGTCGTA CCAGATGGCA AAGCAGCTGT CCAATGCTGG AAGAACGGCT CTTACAGCAT GATTTTGATG GATATCCAGA TGCCGGAAAT GGATGGCCTT GAGGCTACCC GGATCATCCG CTCTCTGGAG GCCGGGCAGG GTGGGCATAT CCCGATTATC GCCATGACCG GCCAGGACAG CCCGGAGGAC GTGGAAAACT GCTACCGGGC CGGAATGGAT CTGCATCTGA AAAAGCCGGT GCAACTGTGT GAACTGGTTG CTGCAGTGGC GCGCGTGGCA CAGTAA
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Protein sequence | MAGSYWPHSW NLLTKIVAVN LVVLFVAFLA LMFYVLPLYE DKLQQQRKQY IAELVDMATG VVENCHQQEL QGRQTTSEAQ QSALATLRVM SRDNGYFWIH DMQLKMIMHP YATHLDNHNL AGYADPNGKK LFVEMNRLVA ASGKGYLEYY WPKPGHDQAI SKISFVKLFV PWGWVIGSGM YLDDISEEVS SLRHKVYLIV GLVLVLITAF SLIVAVRIKK PLQQALELLQ EIPEQYRPVQ SVTALDESNR LLRAMVNLVT ALKAAKEQAE AASSAKGAFL AQMSHEIRTP MNAISGLTEL ALDQAPSAQQ RELLEGISHA ANHLLSLINQ VLDFSKLEAG IVELEQIPFN LRQTLTATLL PFSVRVRSKG VRFETVLADN LPTRVIGDPT RLRQVLVNLV GNAVKFTRQG CIEIDVEKGE QTGNHCELRI MVRDTGIGIP QEKIAQIFAP YSQAAASTTR EFGGTGLGLS IVKQLLEVMQ GTITVESQPG AGTCFSVSVP VEIAGPDTLS GSADLQGVPA QRILLAEDNE INRMMLARLL EKTGHSVDVV PDGKAAVQCW KNGSYSMILM DIQMPEMDGL EATRIIRSLE AGQGGHIPII AMTGQDSPED VENCYRAGMD LHLKKPVQLC ELVAAVARVA Q
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