Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6171 |
Symbol | |
ID | 8729954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7476472 |
End bp | 7477290 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | Integrase catalytic region |
Protein accession | YP_003390930 |
Protein GI | 284041000 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACT ATCGCGTTTC AGCACGTCGT GCATGCGCTG TGATTCAGTT CCGTCGATCC TCCTTGCAGT TTAAATCTCG TCGTCGAGAT GACTCCGTGA TCCGGAAACG AATCAAAGAA ATTGCCCAGG TAAGGGTTCG GTACGGTTAT CAGCGGATTT ATGTGCTGCT GCGCCGGGAG GGTTGGCGTG ACAACCACAA AAGGGTGTAT AGGGTGTATT GTGAAGAAGG ATTGCATCTC AGAAGCAAGC GCCCCCGTCG TAATCGAGCC GCTGCCCACC GGTTAGAGCG CCCCCAACTC TCCAGTATTC ATCAGTGCTG GAGCATGGAT TTTGTGGCTG ACCAGCTTTT TGATGGCCGA AAAATCCGGG CGTTAACTAT AGTTGATAAT TATAGTCGCC AATGCGTGGC CATTCATGTC GGCCAATCGT TGAAAGGGGA TGATGTAGTA GCAGTGATGA ATCAACTAAA AGAGATACAT TTGGCTATGC CCGAGCGGAT TCAAGTAGAT AATGGCAGTG AATTTATATC GAAAGCTCTC GATTTGTGGG CTTATGACAA CGGGGTAACA TTAGACTTTT CCAGACCTGG CAAGCCAACT GATAACCCGT TTATTGAGTC GTTCAATGGC AGTTTTCGGG ACGAGTGCTT GAACGCTCAC TGGTTCTTGT CGTTGGAAGA TGCTCGTGAA AAAATCGAGG CTTGGCGTCA AGAATATAAT TCCTTTCGAC CCCATAGTTC GCTCGGCGGA CGAACACCAG ATGAGGCCGG AATGGGTATT GAAAGAAGAA CAAATGAACG TCCGGTCCTC AATCTTTGA
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Protein sequence | MENYRVSARR ACAVIQFRRS SLQFKSRRRD DSVIRKRIKE IAQVRVRYGY QRIYVLLRRE GWRDNHKRVY RVYCEEGLHL RSKRPRRNRA AAHRLERPQL SSIHQCWSMD FVADQLFDGR KIRALTIVDN YSRQCVAIHV GQSLKGDDVV AVMNQLKEIH LAMPERIQVD NGSEFISKAL DLWAYDNGVT LDFSRPGKPT DNPFIESFNG SFRDECLNAH WFLSLEDARE KIEAWRQEYN SFRPHSSLGG RTPDEAGMGI ERRTNERPVL NL
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