More than 300 homologs were found in PanDaTox collection
for query gene DvMF_1129 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011769  DvMF_1129  two component transcriptional regulator, LuxR family  100 
 
 		 231 aa  444  1.0000000000000001e-124  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  45.13 
 
 		 223 aa  182  5.0000000000000004e-45  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_008751  Dvul_0581  two component LuxR family transcriptional regulator  50 
 
 		 235 aa  170  2e-41  Desulfovibrio vulgaris DP4  Bacteria  normal  0.706783  normal  1 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  33.94 
 
 		 218 aa  141  8e-33  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  35.98 
 
 		 215 aa  133  1.9999999999999998e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_007498  Pcar_0978  two component signal transduction response regulator  33.65 
 
 		 223 aa  129  4.0000000000000003e-29  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0402933  n/a   
 
 
-
 
NC_011769  DvMF_1021  two component transcriptional regulator, LuxR family  36.07 
 
 		 216 aa  128  7.000000000000001e-29  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.794365 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  37.74 
 
 		 224 aa  127  1.0000000000000001e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  33.02 
 
 		 212 aa  125  4.0000000000000003e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  36.99 
 
 		 216 aa  125  5e-28  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  37.44 
 
 		 216 aa  125  6e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  35.21 
 
 		 213 aa  125  7e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  32.69 
 
 		 218 aa  125  7e-28  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  33.82 
 
 		 219 aa  124  1e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  29.61 
 
 		 208 aa  122  6e-27  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  34.39 
 
 		 219 aa  122  6e-27  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  36.15 
 
 		 221 aa  120  1.9999999999999998e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.685529 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  33.18 
 
 		 213 aa  119  3e-26  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  38.19 
 
 		 215 aa  120  3e-26  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  33.18 
 
 		 213 aa  119  3e-26  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  38.19 
 
 		 215 aa  120  3e-26  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  38.19 
 
 		 215 aa  120  3e-26  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  34.39 
 
 		 232 aa  119  3e-26  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  38.03 
 
 		 218 aa  119  3.9999999999999996e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  31.78 
 
 		 213 aa  119  3.9999999999999996e-26  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  37.44 
 
 		 264 aa  119  3.9999999999999996e-26  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  37.28 
 
 		 232 aa  119  3.9999999999999996e-26  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  36.32 
 
 		 223 aa  118  6e-26  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  33.94 
 
 		 232 aa  119  6e-26  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  38.21 
 
 		 220 aa  118  7.999999999999999e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  35.62 
 
 		 217 aa  118  9.999999999999999e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  37.9 
 
 		 227 aa  117  9.999999999999999e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  37.56 
 
 		 228 aa  117  9.999999999999999e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_1233  two component transcriptional regulator, LuxR family  38.14 
 
 		 220 aa  117  9.999999999999999e-26  Conexibacter woesei DSM 14684  Bacteria  normal  0.681342  normal  0.792953 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  37.98 
 
 		 234 aa  117  9.999999999999999e-26  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_010571  Oter_3186  two component LuxR family transcriptional regulator  35.05 
 
 		 215 aa  117  9.999999999999999e-26  Opitutus terrae PB90-1  Bacteria  normal  0.0678517  normal  1 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  36.23 
 
 		 234 aa  117  9.999999999999999e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  36.62 
 
 		 206 aa  117  9.999999999999999e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  33.94 
 
 		 232 aa  116  1.9999999999999998e-25  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_013501  Rmar_2437  two component transcriptional regulator, LuxR family  39.63 
 
 		 218 aa  117  1.9999999999999998e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  37.93 
 
 		 215 aa  117  1.9999999999999998e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  30.99 
 
 		 215 aa  116  3e-25  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  36.24 
 
 		 232 aa  116  3e-25  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  35.81 
 
 		 213 aa  115  3.9999999999999997e-25  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  37.38 
 
 		 224 aa  115  3.9999999999999997e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  33.49 
 
 		 208 aa  115  3.9999999999999997e-25  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  33.18 
 
 		 224 aa  115  3.9999999999999997e-25  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  35.85 
 
 		 222 aa  115  5e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  37.44 
 
 		 215 aa  115  5e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  37.44 
 
 		 215 aa  115  5e-25  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  37.44 
 
 		 215 aa  115  5e-25  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  34.6 
 
 		 217 aa  115  5e-25  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  37.44 
 
 		 215 aa  115  5e-25  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  37.44 
 
 		 215 aa  115  5e-25  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  37.44 
 
 		 215 aa  115  5e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  30.99 
 
 		 215 aa  115  6e-25  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  37.02 
 
 		 253 aa  115  6e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  39.44 
 
 		 213 aa  115  6e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  35.65 
 
 		 225 aa  115  6e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  30.99 
 
 		 215 aa  115  6.9999999999999995e-25  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  30.99 
 
 		 215 aa  115  6.9999999999999995e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  30.99 
 
 		 215 aa  115  6.9999999999999995e-25  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  30.99 
 
 		 215 aa  115  6.9999999999999995e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  30.99 
 
 		 215 aa  115  6.9999999999999995e-25  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  30.05 
 
 		 215 aa  115  7.999999999999999e-25  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  39.15 
 
 		 222 aa  115  7.999999999999999e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  30.52 
 
 		 215 aa  115  7.999999999999999e-25  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  30.52 
 
 		 215 aa  114  8.999999999999998e-25  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  32.42 
 
 		 224 aa  114  1.0000000000000001e-24  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  32.42 
 
 		 224 aa  114  1.0000000000000001e-24  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  37.44 
 
 		 226 aa  114  1.0000000000000001e-24  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  33.04 
 
 		 220 aa  114  1.0000000000000001e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.11 
 
 		 221 aa  114  1.0000000000000001e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.133182 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  36.09 
 
 		 228 aa  114  1.0000000000000001e-24  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  35.85 
 
 		 214 aa  113  2.0000000000000002e-24  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  36.41 
 
 		 223 aa  114  2.0000000000000002e-24  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  36.45 
 
 		 213 aa  113  2.0000000000000002e-24  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  36.53 
 
 		 226 aa  113  3e-24  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  35.27 
 
 		 237 aa  113  3e-24  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  37.07 
 
 		 221 aa  113  3e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  30.05 
 
 		 215 aa  113  3e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  35.62 
 
 		 224 aa  112  3e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  36.18 
 
 		 219 aa  113  3e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  33.78 
 
 		 221 aa  112  4.0000000000000004e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  34.74 
 
 		 218 aa  112  4.0000000000000004e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  35.38 
 
 		 214 aa  112  4.0000000000000004e-24  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  32.42 
 
 		 224 aa  112  5e-24  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  35.75 
 
 		 237 aa  112  5e-24  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  32.74 
 
 		 219 aa  112  5e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  35.48 
 
 		 225 aa  112  5e-24  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  31.88 
 
 		 215 aa  112  6e-24  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal  1 
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  32.55 
 
 		 212 aa  112  7.000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_009997  Sbal195_2246  two component LuxR family transcriptional regulator  30.99 
 
 		 214 aa  112  7.000000000000001e-24  Shewanella baltica OS195  Bacteria  normal  0.0703025  hitchhiker  0.00413313 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  36.74 
 
 		 232 aa  111  8.000000000000001e-24  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.86 
 
 		 222 aa  111  8.000000000000001e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal  1 
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  36.45 
 
 		 215 aa  111  8.000000000000001e-24  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  35 
 
 		 218 aa  111  8.000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  33.8 
 
 		 217 aa  111  9e-24  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  29.19 
 
 		 228 aa  111  9e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  35.38 
 
 		 207 aa  111  9e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>