More than 300 homologs were found in PanDaTox collection
for query gene Ddes_0506 on replicon NC_011883
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011883  Ddes_0506  3-isopropylmalate dehydratase large subunit  100 
 
 
420 aa  860    Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0390  3-isopropylmalate dehydratase large subunit  72.62 
 
 
419 aa  644    Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1792  3-isopropylmalate dehydratase large subunit  73.93 
 
 
418 aa  622  1e-177  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.602442 
 
 
-
 
NC_007519  Dde_3219  3-isopropylmalate dehydratase large subunit  70.71 
 
 
418 aa  593  1e-168  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1742  3-isopropylmalate dehydratase large subunit  67.14 
 
 
420 aa  576  1.0000000000000001e-163  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.482523  n/a   
 
 
-
 
NC_013223  Dret_1458  3-isopropylmalate dehydratase large subunit  65.48 
 
 
419 aa  570  1e-161  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.888399  normal  0.260054 
 
 
-
 
NC_013170  Ccur_04370  3-isopropylmalate dehydratase, large subunit  60.77 
 
 
423 aa  498  1e-140  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal  0.910728 
 
 
-
 
NC_010003  Pmob_1588  3-isopropylmalate dehydratase, large subunit  53.72 
 
 
419 aa  480  1e-134  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0596  3-isopropylmalate dehydratase large subunit  56.94 
 
 
420 aa  478  1e-133  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000659262  normal 
 
 
-
 
NC_011898  Ccel_0126  3-isopropylmalate dehydratase large subunit  57.58 
 
 
419 aa  472  1e-132  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2220  3-isopropylmalate dehydratase, large subunit  55.05 
 
 
415 aa  472  1e-132  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1191  3-isopropylmalate dehydratase, large subunit  55.02 
 
 
424 aa  472  1e-132  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0583  3-isopropylmalate dehydratase, large subunit  56.46 
 
 
422 aa  469  1.0000000000000001e-131  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00310931  normal 
 
 
-
 
NC_012034  Athe_2101  3-isopropylmalate dehydratase large subunit  54.65 
 
 
429 aa  469  1.0000000000000001e-131  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.0493977  n/a   
 
 
-
 
NC_009012  Cthe_2211  3-isopropylmalate dehydratase large subunit  56.9 
 
 
419 aa  469  1.0000000000000001e-131  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00871543  n/a   
 
 
-
 
NC_010424  Daud_0356  3-isopropylmalate dehydratase large subunit  54.87 
 
 
420 aa  468  1.0000000000000001e-131  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.928431  n/a   
 
 
-
 
NC_009253  Dred_0286  3-isopropylmalate dehydratase large subunit  55.26 
 
 
418 aa  465  9.999999999999999e-131  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_10870  3-isopropylmalate dehydratase, large subunit  55 
 
 
420 aa  463  1e-129  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0519  3-isopropylmalate dehydratase large subunit  52.73 
 
 
424 aa  459  9.999999999999999e-129  Hydrogenobaculum sp. Y04AAS1  Bacteria  decreased coverage  0.000000192959  n/a   
 
 
-
 
NC_007644  Moth_2254  3-isopropylmalate dehydratase large subunit  56.37 
 
 
421 aa  459  9.999999999999999e-129  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3356  3-isopropylmalate dehydratase, large subunit  54.87 
 
 
421 aa  458  9.999999999999999e-129  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2142  3-isopropylmalate dehydratase large subunit  55.34 
 
 
419 aa  457  1e-127  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.245729  n/a   
 
 
-
 
NC_011830  Dhaf_2485  3-isopropylmalate dehydratase large subunit  54.03 
 
 
424 aa  455  1e-127  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.836058  n/a   
 
 
-
 
NC_002936  DET0828  3-isopropylmalate dehydratase large subunit  54.65 
 
 
416 aa  454  1.0000000000000001e-126  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0227  3-isopropylmalate dehydratase, large subunit  56.29 
 
 
421 aa  452  1.0000000000000001e-126  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_732  3-isopropylmalate dehydratase, large subunit  54.18 
 
 
417 aa  451  1e-125  Dehalococcoides sp. VS  Bacteria  normal  0.999081  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0476  3-isopropylmalate dehydratase large subunit  55.24 
 
 
431 aa  448  1e-125  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.0146744  n/a   
 
 
-
 
NC_009455  DehaBAV1_0747  3-isopropylmalate dehydratase large subunit  54.42 
 
 
416 aa  447  1.0000000000000001e-124  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2987  3-isopropylmalate dehydratase, large subunit  54.05 
 
 
419 aa  447  1.0000000000000001e-124  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0958791  normal 
 
 
-
 
NC_008554  Sfum_3029  3-isopropylmalate dehydratase, large subunit  54.05 
 
 
419 aa  447  1.0000000000000001e-124  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.367513 
 
 
-
 
NC_010320  Teth514_0015  3-isopropylmalate dehydratase large subunit  53.08 
 
 
418 aa  441  9.999999999999999e-123  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1610  homoaconitate hydratase family protein  52.14 
 
 
417 aa  437  1e-121  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_2194  3-isopropylmalate dehydratase large subunit  50.95 
 
 
421 aa  432  1e-120  Campylobacter concisus 13826  Bacteria  normal  0.454447  n/a   
 
 
-
 
NC_010483  TRQ2_0383  3-isopropylmalate dehydratase large subunit  54.65 
 
 
417 aa  430  1e-119  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0366  3-isopropylmalate dehydratase large subunit  54.65 
 
 
417 aa  429  1e-119  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_2017  3-isopropylmalate dehydratase large subunit  49.4 
 
 
419 aa  425  1e-118  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_0195  3-isopropylmalate dehydratase large subunit  51.66 
 
 
421 aa  424  1e-117  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0608  3-isopropylmalate dehydratase large subunit  52.13 
 
 
421 aa  422  1e-117  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_2259  3-isopropylmalate dehydratase, large subunit  50.71 
 
 
421 aa  418  1e-116  Sulfurospirillum deleyianum DSM 6946  Bacteria  unclonable  0.0000000792323  n/a   
 
 
-
 
NC_009714  CHAB381_0124  3-isopropylmalate dehydratase large subunit  49.4 
 
 
419 aa  410  1e-113  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_010644  Emin_0402  3-isopropylmalate dehydratase large subunit  47.14 
 
 
418 aa  388  1e-107  Elusimicrobium minutum Pei191  Bacteria  normal  normal  0.344506 
 
 
-
 
NC_009637  MmarC7_0399  3-isopropylmalate dehydratase large subunit  46.82 
 
 
424 aa  384  1e-105  Methanococcus maripaludis C7  Archaea  normal  0.320252  normal 
 
 
-
 
NC_009975  MmarC6_1520  3-isopropylmalate dehydratase large subunit  46.82 
 
 
424 aa  384  1e-105  Methanococcus maripaludis C6  Archaea  normal  0.984893  n/a   
 
 
-
 
NC_009135  MmarC5_0436  3-isopropylmalate dehydratase large subunit  45.88 
 
 
424 aa  385  1e-105  Methanococcus maripaludis C5  Archaea  normal  0.560563  n/a   
 
 
-
 
NC_011898  Ccel_1622  homoaconitate hydratase family protein  43.06 
 
 
418 aa  379  1e-104  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0311  3-isopropylmalate dehydratase  44.21 
 
 
421 aa  375  1e-103  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2167  3-isopropylmalate dehydratase large subunit  45.99 
 
 
431 aa  374  1e-102  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009634  Mevan_0471  3-isopropylmalate dehydratase large subunit  45.9 
 
 
424 aa  372  1e-102  Methanococcus vannielii SB  Archaea  normal  0.699773  n/a   
 
 
-
 
NC_013385  Adeg_1100  3-isopropylmalate dehydratase  47.96 
 
 
418 aa  375  1e-102  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_1466  homoaconitate hydratase family protein  45.15 
 
 
429 aa  370  1e-101  Aciduliprofundum boonei T469  Archaea  normal  0.0167474  n/a   
 
 
-
 
NC_008148  Rxyl_1693  homoaconitate hydratase family protein  47.02 
 
 
424 aa  368  1e-101  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.27842  n/a   
 
 
-
 
NC_008346  Swol_0376  3-isopropylmalate dehydratase  47.73 
 
 
416 aa  370  1e-101  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_0789  homoaconitate hydratase family protein  44.5 
 
 
418 aa  366  1e-100  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009253  Dred_2338  homoaconitate hydratase family protein  45.32 
 
 
418 aa  367  1e-100  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1194  homoaconitate hydratase family protein  44.63 
 
 
418 aa  364  1e-99  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0724  homoaconitate hydratase family protein  44.39 
 
 
418 aa  364  2e-99  Methanococcus maripaludis C7  Archaea  normal  0.694886  normal  0.102444 
 
 
-
 
NC_011661  Dtur_1630  3-isopropylmalate dehydratase  43.36 
 
 
418 aa  363  2e-99  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0098  3-isopropylmalate dehydratase, large subunit  44.39 
 
 
418 aa  362  7.0000000000000005e-99  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1030  3-isopropylmalate dehydratase large subunit  42.86 
 
 
431 aa  362  9e-99  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.000620705 
 
 
-
 
NC_009635  Maeo_0289  3-isopropylmalate dehydratase large subunit  44.13 
 
 
425 aa  358  7e-98  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010424  Daud_1036  homoaconitate hydratase family protein  46.19 
 
 
418 aa  356  5e-97  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0621  3-isopropylmalate dehydratase large subunit  45.73 
 
 
418 aa  354  1e-96  Thermotoga petrophila RKU-1  Bacteria  normal  0.0188797  n/a   
 
 
-
 
NC_007955  Mbur_1883  3-isopropylmalate dehydratase large subunit  45.41 
 
 
428 aa  353  2e-96  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0646  3-isopropylmalate dehydratase large subunit  45.5 
 
 
418 aa  354  2e-96  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00455068  n/a   
 
 
-
 
NC_002939  GSU1903  3-isopropylmalate dehydratase large subunit  43.22 
 
 
427 aa  353  2.9999999999999997e-96  Geobacter sulfurreducens PCA  Bacteria  normal  0.473608  n/a   
 
 
-
 
NC_009483  Gura_3709  3-isopropylmalate dehydratase large subunit  42.36 
 
 
427 aa  349  6e-95  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00000129198  n/a   
 
 
-
 
NC_010814  Glov_3165  3-isopropylmalate dehydratase large subunit  41.55 
 
 
427 aa  348  9e-95  Geobacter lovleyi SZ  Bacteria  normal  0.770733  n/a   
 
 
-
 
NC_007517  Gmet_1268  3-isopropylmalate dehydratase large subunit  42.52 
 
 
427 aa  348  1e-94  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000132862  hitchhiker  0.0000000000181918 
 
 
-
 
NC_008553  Mthe_0990  3-isopropylmalate dehydratase large subunit  44.52 
 
 
423 aa  348  1e-94  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_010003  Pmob_1704  homoaconitate hydratase family protein  42.55 
 
 
419 aa  347  2e-94  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0624  3-isopropylmalate dehydratase large subunit  43.59 
 
 
427 aa  347  2e-94  Pelobacter propionicus DSM 2379  Bacteria  normal  0.588299  n/a   
 
 
-
 
NC_008609  Ppro_1926  3-isopropylmalate dehydratase large subunit  43.59 
 
 
427 aa  347  2e-94  Pelobacter propionicus DSM 2379  Bacteria  normal  0.700325  n/a   
 
 
-
 
NC_013526  Tter_2762  3-isopropylmalate dehydratase  44.12 
 
 
413 aa  345  1e-93  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.452591  n/a   
 
 
-
 
NC_002936  DET0448  3-isopropylmalate dehydratase large subunit  43.94 
 
 
417 aa  340  2e-92  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2737  3-isopropylmalate dehydratase large subunit  41.78 
 
 
427 aa  339  5.9999999999999996e-92  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00000214153  n/a   
 
 
-
 
NC_012918  GM21_1504  3-isopropylmalate dehydratase large subunit  41.55 
 
 
427 aa  337  1.9999999999999998e-91  Geobacter sp. M21  Bacteria  n/a    normal  0.691126 
 
 
-
 
NC_013552  DhcVS_390  aconitase/homoaconitase/3-isopropylmalate dehydratase, large subunit  43.23 
 
 
417 aa  337  1.9999999999999998e-91  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_2075  3-isopropylmalate dehydratase  42.14 
 
 
416 aa  335  7e-91  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_0425  3-isopropylmalate dehydratase large subunit  43.71 
 
 
431 aa  335  7.999999999999999e-91  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2361  homoaconitate hydratase family protein  43.81 
 
 
417 aa  335  1e-90  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.859627 
 
 
-
 
NC_013522  Taci_1366  3-isopropylmalate dehydratase  40.1 
 
 
420 aa  332  6e-90  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_0185  homoaconitate hydratase family protein  43.81 
 
 
419 aa  330  2e-89  Methanosphaerula palustris E1-9c  Archaea  normal  0.576372  normal  0.0771341 
 
 
-
 
NC_013926  Aboo_0129  homoaconitate hydratase family protein  37.86 
 
 
418 aa  327  3e-88  Aciduliprofundum boonei T469  Archaea  normal  0.525388  n/a   
 
 
-
 
NC_009943  Dole_3159  3-isopropylmalate dehydratase large subunit  44.39 
 
 
431 aa  324  2e-87  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000477252  n/a   
 
 
-
 
NC_009051  Memar_1949  homoaconitate hydratase family protein  44.18 
 
 
417 aa  324  2e-87  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007498  Pcar_1906  3-isopropylmalate dehydratase large subunit  41.4 
 
 
426 aa  323  5e-87  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0606993  n/a   
 
 
-
 
NC_009767  Rcas_3474  3-isopropylmalate dehydratase large subunit  41.51 
 
 
419 aa  322  8e-87  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0568206  hitchhiker  0.00508785 
 
 
-
 
NC_007355  Mbar_A1961  3-isopropylmalate dehydratase large subunit  43.96 
 
 
413 aa  320  3.9999999999999996e-86  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.344282  normal 
 
 
-
 
NC_009523  RoseRS_1053  3-isopropylmalate dehydratase large subunit  39.67 
 
 
421 aa  318  1e-85  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008942  Mlab_0607  3-isopropylmalate dehydratase, large subunit  44.85 
 
 
392 aa  317  2e-85  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.181914 
 
 
-
 
NC_013501  Rmar_0741  homoaconitate hydratase family protein  41.01 
 
 
432 aa  315  9.999999999999999e-85  Rhodothermus marinus DSM 4252  Bacteria  normal  0.375835  n/a   
 
 
-
 
NC_007955  Mbur_2263  3-isopropylmalate dehydratase large subunit  41.93 
 
 
413 aa  314  1.9999999999999998e-84  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007512  Plut_0601  3-isopropylmalate dehydratase  41.3 
 
 
431 aa  311  1e-83  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0420  3-isopropylmalate dehydratase  38.21 
 
 
422 aa  310  4e-83  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.0665356 
 
 
-
 
NC_009767  Rcas_3516  3-isopropylmalate dehydratase  41.97 
 
 
410 aa  308  1.0000000000000001e-82  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009440  Msed_0830  3-isopropylmalate dehydratase large subunit  40.29 
 
 
415 aa  308  2.0000000000000002e-82  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_012029  Hlac_1102  3-isopropylmalate dehydratase  40.52 
 
 
437 aa  308  2.0000000000000002e-82  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_012791  Vapar_0798  3-isopropylmalate dehydratase large subunit  39.38 
 
 
429 aa  306  4.0000000000000004e-82  Variovorax paradoxus S110  Bacteria  normal  0.963683  n/a   
 
 
-
 
NC_009972  Haur_3302  3-isopropylmalate dehydratase large subunit  40.43 
 
 
421 aa  306  6e-82  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.879653  n/a   
 
 
-
 
NC_008553  Mthe_0788  3-isopropylmalate dehydratase  41.45 
 
 
382 aa  305  7e-82  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
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