Gene Suden_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_2017 
Symbol 
ID3763002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp2099986 
End bp2101245 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content40% 
IMG OID 
Product3-isopropylmalate dehydratase large subunit 
Protein accessionYP_394526 
Protein GI78778211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAAA CTATAACTGA AAAAATATTT TCACAGCATG TTGGAAGAGC AGTTTTTGCA 
GGGGAGATTA TCCGCTGCAA TATAGACATG GTAATCGGGA ATGATATTAC AACTCCAATC
TCTATAAAAG CTTTTGAAGA TAGCGGTGCT ACAAAACTTG CAAATCCTGA TGGTTTTTCT
ATCGTCCTTG ATCACTTTAT TCCAGCAAAA GATATAGCAA GCGCAAATCA GGCGAGAATC
AGCCGTGATT TTGCAAAAAA ATACTCTCTT AAAAACTTTT TTGATGAAAA AGATATGGGG
ATTGAACACG CACTTCTTCC AGAAAAAGGT CTCGTTGTCC CTGGAGATGT CATCATCGGT
GCAGACAGCC ATACGTGTAC TCATGGTGCA CTCGGGGCAT TCTCCACTGG TATGGGGTCA
ACTGACCTAG CATTTGCCAT GATTACTGGG GGAAACTGGT TTAAAGTTCC AGAGTCTATC
AAAGTAAACC TAAGCGGAAA GCCATCAAAA TATACAACTG GCAAAGATAT TATTCTAGAG
ATTATCCGCT TAATCGGTGT TGATGGCGCC CTTTATAAAA CATTGGAGTT CACTGGAAGC
ACAATTGAGC ATCTTAGTAT TGATGATAGA TTTTCAATGT GCAACATGGC GATTGAAGCT
GGCGCAAAGA GCGGAATAGT TGCTTATGAT GAGACAACTA AAGCATTTTT AGCTGATAAA
AACTTAGCAA GAGAACCTCG TATCCACTAC TCAGATGCTG ATGCTTCTTA TGTTCAAATA
TTAAATATAG ATGTTGCTTC GCTTGACCCA GTTATCGCTT ATCCATTCTT GCCATCAAAT
GGGCACAGCG TTGTTCAAGC TCAAAAAGAC AATATTAAAA TAGATCAAGC CTTCATTGGA
AGCTGCACAA ACGGAAGACT AAGTGATCTT AAAGTTGCTG CAGAAATTTT AAAAGGCAAA
AGAGTACATC CCGATGTTCG TCTTATAGTA ACTCCTGGAA CGCAGATGAT ATTAAGAGAA
GCAAACAAAC TCGGCTACAT TGACATAATT GTAGATGCTG GTGGTGTTGT GAGTAACCCT
ACATGTGGAG CTTGTCTTGG TGGGTATATG GGGATTTTAG GAGATAATGA AGTTGCTATC
TCAACAACAA ATCGTAATTT TGTAGGCAGA ATGGGCTCAA GAAGTTCAAA AGTATATCTG
GCAAATTCAG CTGTTGCAGC AATCTCTGCG ATAAAAGGTT ACATTACAGA CCCAAGATAA
 
Protein sequence
MAQTITEKIF SQHVGRAVFA GEIIRCNIDM VIGNDITTPI SIKAFEDSGA TKLANPDGFS 
IVLDHFIPAK DIASANQARI SRDFAKKYSL KNFFDEKDMG IEHALLPEKG LVVPGDVIIG
ADSHTCTHGA LGAFSTGMGS TDLAFAMITG GNWFKVPESI KVNLSGKPSK YTTGKDIILE
IIRLIGVDGA LYKTLEFTGS TIEHLSIDDR FSMCNMAIEA GAKSGIVAYD ETTKAFLADK
NLAREPRIHY SDADASYVQI LNIDVASLDP VIAYPFLPSN GHSVVQAQKD NIKIDQAFIG
SCTNGRLSDL KVAAEILKGK RVHPDVRLIV TPGTQMILRE ANKLGYIDII VDAGGVVSNP
TCGACLGGYM GILGDNEVAI STTNRNFVGR MGSRSSKVYL ANSAVAAISA IKGYITDPR