Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_2017 |
Symbol | |
ID | 3763002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | + |
Start bp | 2099986 |
End bp | 2101245 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | 3-isopropylmalate dehydratase large subunit |
Protein accession | YP_394526 |
Protein GI | 78778211 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCAAA CTATAACTGA AAAAATATTT TCACAGCATG TTGGAAGAGC AGTTTTTGCA GGGGAGATTA TCCGCTGCAA TATAGACATG GTAATCGGGA ATGATATTAC AACTCCAATC TCTATAAAAG CTTTTGAAGA TAGCGGTGCT ACAAAACTTG CAAATCCTGA TGGTTTTTCT ATCGTCCTTG ATCACTTTAT TCCAGCAAAA GATATAGCAA GCGCAAATCA GGCGAGAATC AGCCGTGATT TTGCAAAAAA ATACTCTCTT AAAAACTTTT TTGATGAAAA AGATATGGGG ATTGAACACG CACTTCTTCC AGAAAAAGGT CTCGTTGTCC CTGGAGATGT CATCATCGGT GCAGACAGCC ATACGTGTAC TCATGGTGCA CTCGGGGCAT TCTCCACTGG TATGGGGTCA ACTGACCTAG CATTTGCCAT GATTACTGGG GGAAACTGGT TTAAAGTTCC AGAGTCTATC AAAGTAAACC TAAGCGGAAA GCCATCAAAA TATACAACTG GCAAAGATAT TATTCTAGAG ATTATCCGCT TAATCGGTGT TGATGGCGCC CTTTATAAAA CATTGGAGTT CACTGGAAGC ACAATTGAGC ATCTTAGTAT TGATGATAGA TTTTCAATGT GCAACATGGC GATTGAAGCT GGCGCAAAGA GCGGAATAGT TGCTTATGAT GAGACAACTA AAGCATTTTT AGCTGATAAA AACTTAGCAA GAGAACCTCG TATCCACTAC TCAGATGCTG ATGCTTCTTA TGTTCAAATA TTAAATATAG ATGTTGCTTC GCTTGACCCA GTTATCGCTT ATCCATTCTT GCCATCAAAT GGGCACAGCG TTGTTCAAGC TCAAAAAGAC AATATTAAAA TAGATCAAGC CTTCATTGGA AGCTGCACAA ACGGAAGACT AAGTGATCTT AAAGTTGCTG CAGAAATTTT AAAAGGCAAA AGAGTACATC CCGATGTTCG TCTTATAGTA ACTCCTGGAA CGCAGATGAT ATTAAGAGAA GCAAACAAAC TCGGCTACAT TGACATAATT GTAGATGCTG GTGGTGTTGT GAGTAACCCT ACATGTGGAG CTTGTCTTGG TGGGTATATG GGGATTTTAG GAGATAATGA AGTTGCTATC TCAACAACAA ATCGTAATTT TGTAGGCAGA ATGGGCTCAA GAAGTTCAAA AGTATATCTG GCAAATTCAG CTGTTGCAGC AATCTCTGCG ATAAAAGGTT ACATTACAGA CCCAAGATAA
|
Protein sequence | MAQTITEKIF SQHVGRAVFA GEIIRCNIDM VIGNDITTPI SIKAFEDSGA TKLANPDGFS IVLDHFIPAK DIASANQARI SRDFAKKYSL KNFFDEKDMG IEHALLPEKG LVVPGDVIIG ADSHTCTHGA LGAFSTGMGS TDLAFAMITG GNWFKVPESI KVNLSGKPSK YTTGKDIILE IIRLIGVDGA LYKTLEFTGS TIEHLSIDDR FSMCNMAIEA GAKSGIVAYD ETTKAFLADK NLAREPRIHY SDADASYVQI LNIDVASLDP VIAYPFLPSN GHSVVQAQKD NIKIDQAFIG SCTNGRLSDL KVAAEILKGK RVHPDVRLIV TPGTQMILRE ANKLGYIDII VDAGGVVSNP TCGACLGGYM GILGDNEVAI STTNRNFVGR MGSRSSKVYL ANSAVAAISA IKGYITDPR
|
| |