Gene Mbur_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_2263 
Symbol 
ID3997217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp2384662 
End bp2385903 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content48% 
IMG OID637959991 
Product3-isopropylmalate dehydratase large subunit 
Protein accessionYP_566874 
Protein GI91774182 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTACCA TCAGTGAAAA AATATTCAGC AAAGCAAGTG GAAAGGATGT AAAAGCCAAT 
GAGTTCGTCA TGGCAAAAGT AGACTATGCA ATGGCTCACG ATGGCACAAG TGTGCTTGCA
GTACGTTCTT TCAAGAACAT GGGGCTTGAA AATGTGTGGG ATCCAAAGCG CATTGTTATT
CCTTTTGATC ATTTAACTCC TGCAAACACG GAAACTACTG CGGATTTACA TCATGATATC
CGTGAATGGA TCGGGGGGCA GGGCATACCG AACTTCTTCG ATGTTGGTGA AGGTATCTGC
CATCAGGTCC TTCCTGAGAA CGGCTTTGCA ATGCCGGGAA AGCTCGTTGT TGGTGCTGAT
TCCCATTCAT GCACCTATGG CGCTTTCGGT GCGTTTGGTA CGGGTGTCGG TGCAACTGAC
ATGTCCGAGA TATTTGCATC CGGTGAACTC TGGTTCAGGG TGCCTGAGAC CATTAAAGTA
ACTGCTTCCG GAAAACTGAA GAAGGATGTT CTTGCCAAGG ACGTAACACT CAAAGTGATC
GGTACGGTTG GTGCATCCGG AGCTACTTAC AAAGCTGCTG AATTCTATGG TGATACAATA
ACCGATCTGT CAATATCCGG CAGGATGACC TTATCAAATA TGGCTATTGA GATGGGTGCT
AAAGCAGGCA TCGTTCCGCC TGACCAAAAG ACCTTCGATT TCCTTGAAGG CAGGGCTGTG
GAAGGTTATG AGCCAGTTTA TGCAGATGAG GATGCTGAAT ACTGTGCAGA ATATGACATT
GATGGTGCGA ACCTTGAGCC ACAGATTGCA CTTCCGCATC AGGTGGACAA TGTGTGTGAT
GTATCGGAGA TCGAGGGTAA AAAGGTGGAC CAGGTGTTCA TCGGAACCTG TACCAATGGA
CGACTGGAAG ATCTTGAAGT GGCCGCTGAG ATCCTCAAAG GTGAGCAGGT CGCTGTAAGG
ACCATTGTAA TTCCGGCATC CCGTTCAATA ATGCTTGAAG CTGTCCGAAA TGGTACAGCA
GAAACACTTC TCGATGCTGG TGTCACACTG GGCTCTCCTG GATGTGGTCC ATGTCTTGGC
GGACATATGG GGGTTATCGG TGAAGGTGAG GTATGTATCT CGACAGCAAA CCGTAATTTC
AGAGGCAGGA TGGGCAAAGG CGGTTTCATC TATCTTTCAT CTCCTGCTAC AGCAGCGGCA
TCAGCGATCA CAGGTGAAAT AACCGACCCA AGAACTGTAT GA
 
Protein sequence
MSTISEKIFS KASGKDVKAN EFVMAKVDYA MAHDGTSVLA VRSFKNMGLE NVWDPKRIVI 
PFDHLTPANT ETTADLHHDI REWIGGQGIP NFFDVGEGIC HQVLPENGFA MPGKLVVGAD
SHSCTYGAFG AFGTGVGATD MSEIFASGEL WFRVPETIKV TASGKLKKDV LAKDVTLKVI
GTVGASGATY KAAEFYGDTI TDLSISGRMT LSNMAIEMGA KAGIVPPDQK TFDFLEGRAV
EGYEPVYADE DAEYCAEYDI DGANLEPQIA LPHQVDNVCD VSEIEGKKVD QVFIGTCTNG
RLEDLEVAAE ILKGEQVAVR TIVIPASRSI MLEAVRNGTA ETLLDAGVTL GSPGCGPCLG
GHMGVIGEGE VCISTANRNF RGRMGKGGFI YLSSPATAAA SAITGEITDP RTV