| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1961 |
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| Symbol | |
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| ID | 3625500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 2451447 |
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| End bp | 2452688 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637700841 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_305477 |
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| Protein GI | 73669462 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.344282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGAACAA TTAGTGAAAA AATATTTTCC CGGGCAACGG GAGCAGAGGC AAAGGCAAAC
GATTTTGTCC TTGCAGATGT TGATTATGCA ATGGCGCATG ACGGCACCTC AGTACTTGCA
GTTAATGCTT TTAAGGAAAT GGAAATGAAG AAGGTCTGGG ACCCCTCAAG GATTGTAATT
CCTTTCGACC ACATCGCGCC TGCAAATAAT GAGATATCAG CTACTTTGCA AAAGGAAATC
CGGGAATGGG TAAAAGAACA AGGAATTCCG AATTTTTACG AGCTTGGAGA AGGAATCTGT
CATCAAGTAC TCCCCGAAAA TGGATTCGCA CTGCCTGGAA AACTGGTTGT GGGCGCTGAT
TCGCATTCCT GCACCTATGG GGCTTTCGGA GCTTTTGCCA CAGGTGTAGG AGCTACCGAC
ATGGCTGAAA TTTTTGCCAC AGGTAAGCTC TGGTTTAAGG TTCCTGAGAG TTTCAGGTTC
ACGGTAGAAG GAAGGCTTGG AAAAGGGGTT TATGCAAAAG ATCTGACCCT TTACCTTATT
GGGAAGACCG GAATTGACGG TGCCACCTAT AAGGCTGTAG AGTTTTACGG ACAGGCTATC
TCCGAATTAT CGGTTTCCGG CAGAATGACA CTCTGCAACA TGGCAATCGA AATGGGAGCA
AAAACCGGAA TTGTGCCACC GGACGAAAAA ACCTTTGCCT TCCTGAAAAA TCGGGCGGCT
GCTCCTTATG ATCCGGTTTA TGCCGATCAG GATGCAGTCT ATGTAAAAGA ACCCGTTTAC
TCTGCTGAAG ATATCGAGCC TCAGGTAGCC TGTCCGCATC AGGTTGACAA CGTAAAACCT
GTGGGAGAAG TTGAAGGTAC CCACATAGAC CAGGTTTTCA TAGGGACGTG CACAAATGGC
AGACTTGAAG ACCTCGAGGT CGCAGCAGCA ATCCTTAAAG GAAAAAAGGT TGCAGTCAGG
ACTATTGTAA TTCCTGCATC TCGCACGACT CTCCTTGCAG CAATTGAAAA CGGAACGATG
GAAATTCTGC TCAAAGCAGG CATTACGCTT GCAACCCCTG GCTGCGGGCC CTGTCTTGGC
GCTCACCAGG GAGTGCTCGG TGAAGGAGAA GTTTGCCTTT CAACCGCAAA CCGAAACTTC
AAGGGCAGGA TGGGAAAAAG TGGTTTTATC TACCTGGCAT CCCCTGCAAC CGCAGCAGCC
TCGGCATTGG CAGGAGAAAT TACGGATCCA AGGACAGTTT GA
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| Protein sequence | MGTISEKIFS RATGAEAKAN DFVLADVDYA MAHDGTSVLA VNAFKEMEMK KVWDPSRIVI
PFDHIAPANN EISATLQKEI REWVKEQGIP NFYELGEGIC HQVLPENGFA LPGKLVVGAD
SHSCTYGAFG AFATGVGATD MAEIFATGKL WFKVPESFRF TVEGRLGKGV YAKDLTLYLI
GKTGIDGATY KAVEFYGQAI SELSVSGRMT LCNMAIEMGA KTGIVPPDEK TFAFLKNRAA
APYDPVYADQ DAVYVKEPVY SAEDIEPQVA CPHQVDNVKP VGEVEGTHID QVFIGTCTNG
RLEDLEVAAA ILKGKKVAVR TIVIPASRTT LLAAIENGTM EILLKAGITL ATPGCGPCLG
AHQGVLGEGE VCLSTANRNF KGRMGKSGFI YLASPATAAA SALAGEITDP RTV
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