Gene DET0828 details

Gene Information

• Locus tag: DET0828
• Symbol: leuC
• ID: 3229891
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 756056
• End bp: 757306
• Gene Length: 1251 bp
• Protein Length: 416 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637120392
• Product: 3-isopropylmalate dehydratase large subunit
• Protein accession: YP_181555
• Protein GI: 57234424
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0065] 3-isopropylmalate dehydratase large subunit
• TIGRFAM ID: [TIGR01343] homoaconitate hydratase family protein; [TIGR02083] 3-isopropylmalate dehydratase, large subunit; [TIGR02086] 3-isopropylmalate dehydratase, large subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTAG TTGAAAAAAT ACTGGCCGCC CACAGCGGCA AAACTCAGGT CAGCCCGGGT 
GATTTTATAA ACGCCAAGGT AGACCTGGTG CTGGCTAATG ACATTACCGC ACCTATAGCC 
GTAAAAGAGT TTAAGAAGAT TGGGGTCAGC AAAGTATTTG ACCCCAAAAA GATAGTTTTT 
GTGCCTGACC ATTTTGTACC CAACAAGGAC ATTGCATCTG CCGAACAGGT AAAAATGGTG 
CGTGAGTTTG CCCGTGAGCA GGGTATACTC TTTTTTGAAT GCGGTAAAAT GGGTGTTGAG 
CATGTAATCC TGCACGAGCA GGGTCTGGTA CTGCCGGGGG ATATTGTGGT AGGCGCTGAC 
TCCCATACCT GCACTTACGG GGCACTGGGC GCTTTTACTA CCGGCATGGG CTCAACCGAT 
ATAGCCGCCG CCATGGCCAC CGGTGAGGTT TGGATGAAAG TCCCCCCCAC CATCAAATTT 
AACTATTCGG GTAAGCTGCC CAAATGGATT GGCGGTAAAG ACCTTATTTT GTTTACCATA 
GGTCAGATAG GGGTAGACGG GGCTTTGTAC TCTGCCATGT ATTTCTGCGG AGAGGCTATT 
GATGCCCTTT CCATGGAAAA CCGCTTTACC ATGTCCAATA TGGCCATAGA GGCCGGCGGC 
AAGGCAGGTC TTTTCAGGGT TGACGAAAAG ACTCTGGAAT ATGTGACCCC CAGAGCCAAA 
CGCCAGTATA CGGTTTATGA TAATGATGCT GATGCGTCTT ATGCCAAAAC ATATAACTTT 
GATATTTCCA AGCTTGAGCC GCAGGTATCA CTGCCGCATT CACCGGCAAA TGCCCGCCCC 
ATCAGCCAGA TTGGTAAAAT AAAGGTTGAC CAGGTTATCA TCGGCTCATG CACCAACGGC 
AGGCTGGAAG ACCTGGCCAT ATCTGCCAAA CTGCTTGAAG GGAATAAAGT CAGCCCTGAT 
TTGAGGACTA TTGTTATACC CGGTTCGCAG CAGGTCTATC TGGATGCCCT GAAAGCCGGC 
TATATTGAAA CCTTTATCAA TGCCGGGGTT GCGGTTTCCA CTCCCACCTG CGGTCCTTGC 
CTCGGCGGGC ATATGGGTAT TTTGGCCGCC GGTGAACGCT GTCTGGCAAC TACCAACCGC 
AATTTCGTAG GGCGTATGGG CAGCCCCAAG AGCGAAGTAT ACCTGGCCGG GCCGGCCGTT 
GCCGCCGCTA CCGCCATCAA GGGATATATT GCCCATCCCG ATGAAATTTA A 

 

Protein sequence

MNLVEKILAA HSGKTQVSPG DFINAKVDLV LANDITAPIA VKEFKKIGVS KVFDPKKIVF 
VPDHFVPNKD IASAEQVKMV REFAREQGIL FFECGKMGVE HVILHEQGLV LPGDIVVGAD 
SHTCTYGALG AFTTGMGSTD IAAAMATGEV WMKVPPTIKF NYSGKLPKWI GGKDLILFTI 
GQIGVDGALY SAMYFCGEAI DALSMENRFT MSNMAIEAGG KAGLFRVDEK TLEYVTPRAK 
RQYTVYDNDA DASYAKTYNF DISKLEPQVS LPHSPANARP ISQIGKIKVD QVIIGSCTNG 
RLEDLAISAK LLEGNKVSPD LRTIVIPGSQ QVYLDALKAG YIETFINAGV AVSTPTCGPC 
LGGHMGILAA GERCLATTNR NFVGRMGSPK SEVYLAGPAV AAATAIKGYI AHPDEI