| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3159 |
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| Symbol | |
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| ID | 5696021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3785401 |
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| End bp | 3786696 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641265778 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_001531039 |
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| Protein GI | 158523169 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit
[TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000477252 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAAA CGATTGCACA GAAAATTTTT GACGCGCATA GTGTGGACCA GCCCTTTGGA
GAGGTTCATG TGATAAGGCT TGACGGTGTG TTCTGTCATG AGATCACCAC ACCCACAGCC
ATCTGCGACC TGATGGAAAA AAATAAGGAC CGGGTCTTTG ATCCGTCAAA GATCAAGGCG
GTGATCGACC ACGTGACCCC GGCCAAGGAC TCCAAGACCG CGGCCCAGGG AAAGATCCTG
CGGCAGTGGG CCCGGCGTCA CGGCATCGAC GGGTTTTTCG ATATCGGCCG CAACGGCGTG
TGCCACGCGC TTTTTCCTGA GCAGGGGTTT GTGCGGCCCG GCCACACCAT TATCATGGGA
GACTCCCACA CCTGCACCTA CGGCGCTTTT GGCGCCTTTG CCGCGGGCGT GGGCACCACC
GACCTGGAGG TGGGTATTTT AAAGGGCGTC TGCGCCTTAA ACTATCCGTC CACCATCAAG
GTGGTGTTAA ACGGGAAGCT TTCCCCCGGC GTTTATGCCA AGGACGTGAT CCTGGCGGTG
ATTGCCGAGC TGGGGGTCAA CGGCGCCACC AACCGGGTGA TTGAGTTTAC CGGCCCCTGC
GTGGACGCTA TGAGCATGGA GGCCCGCATG ACCCTGTGCA ACATGGCCAT CGAGGCCGGG
GGCACCTGCG GCATCTGCTA TCCGGACAAG ACCACCGTGG CCTACCTGTG GGAGTTCATC
AAGGGCGAAT ACCCTTCCCG GCAGGCGGCT CTCAAGGCGT TCAAGAAACT GGTATCCGAC
CCGGACGCGG ATTACGACCG GGTACTGGAA ATGGATATCA GCGACCTGTC GCCCCGGGTG
ACCTACGGCT ACAAGCCGGA CTGTGTCAAA CCCGTGGCCG AGATGGAGGG CACCCCCATC
GACCAGGTCT ATATCGGCTC GTGCACCAAC GGCCGGCTGG AGGACCTGCG GGTGGCCGCA
AAAGTACTGA AAGGCAAAAA GGTGCATCCG TCGGTGCGGG GCATTGTCTC TCCGGCCACG
CCCACGGTGT TTCAGGCCGC GCTTGAGGAG GGACTGATCG CGACGTTCAT GGCCGCGGGT
TTCTGTGTCA CCAACCCCAC CTGCGGGGCC TGCCTGGGCA TGAGCAACGG CGTGCTGGCC
CCGGGCGAGG TGTGCCTGTC CACCACCAAC CGGAATTTCA ACGGCCGCAT GGGCAAGGGC
GGCATGGTTC ACCTGGCCAG CCCGGCCACG GCCGCGGCCG GCGCCATTGC CGGTTGCATC
ACCAACTCGA AACTGTATAA AAAACGCGCG GAGTAG
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| Protein sequence | MGKTIAQKIF DAHSVDQPFG EVHVIRLDGV FCHEITTPTA ICDLMEKNKD RVFDPSKIKA
VIDHVTPAKD SKTAAQGKIL RQWARRHGID GFFDIGRNGV CHALFPEQGF VRPGHTIIMG
DSHTCTYGAF GAFAAGVGTT DLEVGILKGV CALNYPSTIK VVLNGKLSPG VYAKDVILAV
IAELGVNGAT NRVIEFTGPC VDAMSMEARM TLCNMAIEAG GTCGICYPDK TTVAYLWEFI
KGEYPSRQAA LKAFKKLVSD PDADYDRVLE MDISDLSPRV TYGYKPDCVK PVAEMEGTPI
DQVYIGSCTN GRLEDLRVAA KVLKGKKVHP SVRGIVSPAT PTVFQAALEE GLIATFMAAG
FCVTNPTCGA CLGMSNGVLA PGEVCLSTTN RNFNGRMGKG GMVHLASPAT AAAGAIAGCI
TNSKLYKKRA E
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