| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0402 |
|---|
| Symbol | |
|---|
| ID | 6262542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | + |
|---|
| Start bp | 429388 |
|---|
| End bp | 430644 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642610869 |
|---|
| Product | 3-isopropylmalate dehydratase large subunit |
|---|
| Protein accession | YP_001875296 |
|---|
| Protein GI | 187250814 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
|---|
| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.344506 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCAGA CAATTGCAGA AAAAATTATT TCAAACCATT CCGGACGTCG CGTAAAAGCG
GGGGAATTTG TTATAGCAGA CGTTGATTTA ACGGCCGTGC AGGACGGTAC CGGCCCTTTA
ACGGTTGAAG AGCTTAAAAA AGCCGGTTTT ACCAAACTGG CAAATCCCGC AAGAACAATA
TTATTTATTG ACCATGCGGC CCCAAGCCCC AGAAAAGAGC TTTCAAACTC ACAAGTTGTT
TTAAGAAATT TCGCTAAAGA AACGGGCGCG ATACTTTCCG AAATTGGCGA AGGAGTTTGC
CATCAGCTTT TGGCGGAAAA ATACGTAAAC CCCGGCGAAA TTCTAATCGG CGCTGATTCC
CACACCTGTA CTGGCGGGGC GCTTGGCGCG TTTGCCACGG GTATGGGTTC AACGGACGTG
GCCGTCGGCA TGGCTTTAGG TAAAACATGG CTTAAAGCGC CGCAGACTTT TAAAATAGAG
GTTGAAGGCG CGTTTAAAAA AGGTGTAGGC GCTAAGGACC TTATTTTGCA TTTAATAGGC
GTTATCGGCG CGGACGGCGC TACATATAAA GCGCTTGAGT TTCACGGTTC AACAATCAGA
AATATGGAAA TGGCAGACCG CTTTACCTTA GCCAATATGG CTGTGGAAGC GGGCGCGAAA
GCGGGCCTTT TCTTTACTGA TGAAAAAACA AGGGCTTACC TTGCCGAACG CGGCAGGGGG
GATAATTTTA AACTTATTTC CGCCGATGAA GGCGCTGATT ACGAAAAGGT TATTAAAATA
GACGCTTCCT CTTTAGAACC TACCGTTTCC TGCCCGCACA CGGTTGACAA TACAAAAACA
GTAGGCGAAC TTAAAGACAT TAAAGTTAAC CAGGTTTTTA TAGGCACCTG CACAAACGGA
CGTATAGAGG ATTTAAGAAT AGCAGCCGAG ATTTTGAAAG ATAAAAAAGT TAACCCCGGT
ACAAGAACTT TTATAACGCC CGCCTCGCGC GACGTTATGT TAGCCGCCTT AAAAGAAGGG
CTTATAGAAA TTTTTGTTAA GGCGGGCGCC AGCGTGCAAA CGCCTGGCTG CGGGCCTTGC
GTTGGCGTGC ACGGCGGCAT TTTGGGCGAT GGGGAAGTTT GTTTAGCCAC CCAAAACCGC
AATTTCCAGG GTCGCATGGG CAATACAAAA GGTTTTATTT ATCTTTCCTC GCCCGCAGTA
GCCGCTTACA GCGCTTTAAA AGGTTATATT TCCGACCCCA GGGAAATATT AAAATAA
|
|---|
| Protein sequence | MPQTIAEKII SNHSGRRVKA GEFVIADVDL TAVQDGTGPL TVEELKKAGF TKLANPARTI
LFIDHAAPSP RKELSNSQVV LRNFAKETGA ILSEIGEGVC HQLLAEKYVN PGEILIGADS
HTCTGGALGA FATGMGSTDV AVGMALGKTW LKAPQTFKIE VEGAFKKGVG AKDLILHLIG
VIGADGATYK ALEFHGSTIR NMEMADRFTL ANMAVEAGAK AGLFFTDEKT RAYLAERGRG
DNFKLISADE GADYEKVIKI DASSLEPTVS CPHTVDNTKT VGELKDIKVN QVFIGTCTNG
RIEDLRIAAE ILKDKKVNPG TRTFITPASR DVMLAALKEG LIEIFVKAGA SVQTPGCGPC
VGVHGGILGD GEVCLATQNR NFQGRMGNTK GFIYLSSPAV AAYSALKGYI SDPREILK
|
|---|
| |