| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1036 |
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| Symbol | |
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| ID | 6026862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1086443 |
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| End bp | 1087699 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641593848 |
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| Product | homoaconitate hydratase family protein |
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| Protein accession | YP_001717180 |
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| Protein GI | 169831198 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00139] homoaconitase
[TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCTGA ACATCATTGA GAAAATACTA TCCCGTAAGA GCGGACGCGC AGTGCGTGTC
GGGGACATTG TGGTGGCCGA AGTTGATTTC GTGATGGGCC AGGACGGTAC TTCGCCCCTG
GCCATCAACG CGTTCCGCGC GATGGGGGGG AAGGCCCTGT TCGACCCGGC GAAGGTGGCG
CTGGTGATCG ACCACAGCGC GCCCAGCCCC TCCGAAGGTG TCTCCAACCT GCATAAATTC
ATGCGGAACT TCGCCCGGGA AACCGGGTGC CACCTGTACG ACGTAGGTGA CGGGGTGTGC
CACCAATTGA TGCTGGAATC GGGAGCGGTC GGGCCGGGTT CCTTAGTCGT TGGCGCCGAC
TCGCATACCT GCACCTACGG AGCGTTGAAC GCCTTCGCCA CCGGGGTGGG GTCGACCGAT
CTCGCCGCCG CCCTGATCTC CGGCCGGATG TGGTTCAAGG TGCCGCCCAC GCTGAAGTTC
GTTTGCCACG GGATACTGCC TCCCGGAGTG TACAGCAAGG ACCTGATCCT ATTTCTGATC
GGACAGGTCA CCGCCGACGG GGCCACCTAC ATGTCGGTCG AGTTCAGCGG AGAGGCGGTC
CGGGCACTGT CGATGGAGGC CCGGTTCACC ATCTCGAACA TGGCCGTGGA GATGGGCGCG
AAGGCGGGGC TGATGGAGGC GGATGAGCGG ACGGCCGAAT GGGTAGCCCG GTACAGCCGG
CGCACGTTCG AGCCGGCCGC ACCCGATCCG GATGCGGTTT ACGAACGAAT ACTGGAGTTT
GACGTGTCCG GGTTGGAGCC GCAAGTCGCC CGGCCCCACC GGGTGGACAA CGTGGCTCCG
CTCAGTGAGG TGGCCGGCTT GCCGGTGGAC GAGGCCGTTC TGGGGACCTG CACGAACGGG
CGTCTGGAGG ACTTGCGGAT CGCCGCGGCT CTCGTCAGGA GGTACCGGGT GTCCCCGAGG
GTGCGTTTCA TTGTGGCGCC CGCCTCGCGG CACGTGTACC TGCAGGCGCT GCGGGACGGC
ACCCTGGAGA CGCTGGTGCA GGCCGGGGCC GCGGTGGTCA CTCCGGGCTG CGGCCCGTGT
GTGGGTACAC ACAACGGCGT GCCCGCCGAT GGCGAACGGG TGATCTCGAC CGCCAACCGG
AACTTCAAAG GCCGCATGGG GAACCGGAAC GCGGAGATTT ACCTGGCTTC ACCAGCGGCG
GTGGCCGCGG CGGCCCTGAC CGGTGAGATC ACCGACCCCA GAGAATTCTT GAAGTAG
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| Protein sequence | MGLNIIEKIL SRKSGRAVRV GDIVVAEVDF VMGQDGTSPL AINAFRAMGG KALFDPAKVA
LVIDHSAPSP SEGVSNLHKF MRNFARETGC HLYDVGDGVC HQLMLESGAV GPGSLVVGAD
SHTCTYGALN AFATGVGSTD LAAALISGRM WFKVPPTLKF VCHGILPPGV YSKDLILFLI
GQVTADGATY MSVEFSGEAV RALSMEARFT ISNMAVEMGA KAGLMEADER TAEWVARYSR
RTFEPAAPDP DAVYERILEF DVSGLEPQVA RPHRVDNVAP LSEVAGLPVD EAVLGTCTNG
RLEDLRIAAA LVRRYRVSPR VRFIVAPASR HVYLQALRDG TLETLVQAGA AVVTPGCGPC
VGTHNGVPAD GERVISTANR NFKGRMGNRN AEIYLASPAA VAAAALTGEI TDPREFLK
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