| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2142 |
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| Symbol | |
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| ID | 4283158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2460563 |
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| End bp | 2461822 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638139022 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_754804 |
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| Protein GI | 114567650 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02083] 3-isopropylmalate dehydratase, large subunit
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.245729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATGA CCATCAGTCA AAAGATCCTG GCCAGGCATG CCGGGCGTAA AATGCTGGAG
CCCGGGGAAC TAATAAATTG CCAGCTGGAC CTGGTGCTGG GTAATGATGT AACCGCCCCG
GTAGCTATCG CAGAATTTAA GAAATTGGGT ATAGATAAGG TCTACGATCA GAGCCGGGTA
GTACTGGTTC CCGATCATTT TACTCCCAAC AAGGACATAA AGTCAGCGGA ACAGTGTAAG
ATACTACGGG ATTTTGCCCG CCAGTATGAG ATAGAAAATT ACTTTGAAAT CGGCCAGATG
GGAATAGAGC ACTGCCTCTT GCCCGAACAG GGTCTGGTAG TTCCGGGTGA CCTGATTATC
GGGGCTGATT CCCACACCTG TACCTACGGA GCCCTGGGAG CCTTTGCTAC CGGAGTGGGT
TCTACCGATA TGGCGGCGGG AATGGCTACC GGTGAAGCCT GGTTTAAGGT TCCCGAGAGT
ATTAAGTTTG TCTATTATGG CCACCTGCCC CGCTGGGTAG GAGGCAAAGA CCTCATACTG
CATACCATTG GTGATATTGG AGTTGATGGC GCCCGTTATA TGTCTATGGA ATTCACTGGT
GAGGTTATAC AGAATCTCTC TATGGATAAC CGCTTTACCA TGGCCAATAT GGCCATAGAA
GCCGGCGGCA AGAATGGCAT CTTCGCTGCT GATGAGATTA CCCTGGACTA TGTTAAAAAG
CGGGTTAAGC GGCCTTTTGA ACTTTATCAA TCCGACCCTG ATGCCGTGTA TTTCGATATC
AAAGAATACG ATGTATCTAA GCTGGAACCG GTGGTGGCTT TTCCCCATCT ACCGGAGAAT
ACCCGTCCGG TCACCGAGGC TACTCATGTA AGCCTGGATC AGGTGGTTAT AGGTTCCTGT
ACCAATGGTC GAATTGAAGA CATGGAAATT ACCGCTTCCT TGCTGAAAGG GCAAAAGGTA
CACCCGGAGA TAAGAGTGAT TATTTTCCCC GGAACCCGGG AGATTTACCT GGAAGCCTTG
CGCCGTGGCT ATATTGAGAC CTTTATAGAA GCGGGGGCTG TCGTCAGCAC TCCTACCTGT
GGACCCTGTC TGGGGGGGCA TATGGGAATT CTGGCCCGGG GGGAAAAAGC CCTGGCTACC
ACCAATCGTA ATTTTGTTGG GCGCATGGGC CACCCGGAGA GTGAAGTCTA CCTGGCTAGC
CCGGCGGTAG CAGCGGCCAG TGCTGTTAAG GGCAGAATTA CTGCTCCCTG GGAGCTATAA
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| Protein sequence | MGMTISQKIL ARHAGRKMLE PGELINCQLD LVLGNDVTAP VAIAEFKKLG IDKVYDQSRV
VLVPDHFTPN KDIKSAEQCK ILRDFARQYE IENYFEIGQM GIEHCLLPEQ GLVVPGDLII
GADSHTCTYG ALGAFATGVG STDMAAGMAT GEAWFKVPES IKFVYYGHLP RWVGGKDLIL
HTIGDIGVDG ARYMSMEFTG EVIQNLSMDN RFTMANMAIE AGGKNGIFAA DEITLDYVKK
RVKRPFELYQ SDPDAVYFDI KEYDVSKLEP VVAFPHLPEN TRPVTEATHV SLDQVVIGSC
TNGRIEDMEI TASLLKGQKV HPEIRVIIFP GTREIYLEAL RRGYIETFIE AGAVVSTPTC
GPCLGGHMGI LARGEKALAT TNRNFVGRMG HPESEVYLAS PAVAAASAVK GRITAPWEL
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