| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Taci_1366 |
|---|
| Symbol | |
|---|
| ID | 8631219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013522 |
|---|
| Strand | + |
|---|
| Start bp | 1412874 |
|---|
| End bp | 1414136 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | 3-isopropylmalate dehydratase |
|---|
| Protein accession | YP_003317879 |
|---|
| Protein GI | 269792975 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAC CTAGGACCTT CGCGGAGAAG GTGCTCGGCA AGTGGGCGGG GCGGCCGGTT
AAGGCCGGTG ACGTGGTCAC CGTGGAGCCC CACTTCTGCA TGAGCCACGA CAACGCGGCC
CCCATAGCCA GGACCTTCAA GAAGATAGGG GTCTCAAGGG TCTTCGACCC CAACCGGATC
GTCTTCATCC TGGACCACGC GGTGCCAGCC CCCTCGGACG ACCACGCCCA GAACCACAAG
GAGATCCGGG AGTTCGTCAG GGAGCAGGGG ATACCCCACT TCTTCGACGT GACCAGCAAG
GGCGGGGTGT GCCACCAGAA GATGTGCGAG GAGGGCTACG CCCTGCCGGG GCTCATCATG
ATAGGCAGCG ACAGCCACAC CTGCACCTAC GGGGCTTTCG GGGCCTTCTC CACCGGCATA
GGCCGCTCCG AGATGGCCGC CGCCTGGGCC ACCGGCAAGA TCTGGTTCCG GGTGCCGGAG
TCCATGAAGA TCACAGTCAC CGGCTCATTC CCCAAAGGGG TATCCGCCAA GGACCTGATC
CTCAAGATCA TAGGCGACAT AGGGGCCGAC GGGGCGGACT ACATGAGCGT GGAGTTCCAC
GGGGAGGGCA TCCTCCAGAT GTCCCTGTCG GAGCGGATGA CTTTGTGCAA CATGGGGATA
GAGATGGGGG CCAAGAACGC GGTCTGCCCG CCGGACCAGA AGGTGCTGGA CCACGTGAGG
GACATTGCCA AGAGTGACCA GTGGGAGGCC ATCTGGGCGG ACCAGGGGGC CACTTACGCC
AAGGAGCTGT CCTACTGCCT GTCGGAGCTG GTACCCGGGG TGGCCAAGCC CCACACGGTG
GACAACTACG CCCCGGTGGA CCAGGTGAAG GGGGCCCAGA TCCACCAGGC CTTCATCGGC
AGCTGCACCA ACGGCCGGAT CGAGGACCTA AGGGAGGCGG CAACGATCCT CAAGGGCCGT
CAGGTGGCGG TGCGCACCAT AGTGATCCCC GCCTCATGGC GGGTCTACCG GCAGGCCATG
GAGGAGGGTC TCCTGGAGAC GTTCCTGGAC GCGGGCTGCG TGATCTCCAA CCCGGGATGC
GGTCCCTGCA TGGGGAACCA CCAGGGTATC CTGGCCCCCG GGGAGACGTG CATAAGCACC
GCCAACCGGA ACTTCAAGGG CCGGATGGGC AACAAGGACA GCTTCATATA CCTGGCGAGC
CCACTCACCG TGGCGGCCTC CGCTGTGGCG GGGGAGATAG CGGACCCCAG GGAGGTGCTG
TAG
|
|---|
| Protein sequence | MTEPRTFAEK VLGKWAGRPV KAGDVVTVEP HFCMSHDNAA PIARTFKKIG VSRVFDPNRI
VFILDHAVPA PSDDHAQNHK EIREFVREQG IPHFFDVTSK GGVCHQKMCE EGYALPGLIM
IGSDSHTCTY GAFGAFSTGI GRSEMAAAWA TGKIWFRVPE SMKITVTGSF PKGVSAKDLI
LKIIGDIGAD GADYMSVEFH GEGILQMSLS ERMTLCNMGI EMGAKNAVCP PDQKVLDHVR
DIAKSDQWEA IWADQGATYA KELSYCLSEL VPGVAKPHTV DNYAPVDQVK GAQIHQAFIG
SCTNGRIEDL REAATILKGR QVAVRTIVIP ASWRVYRQAM EEGLLETFLD AGCVISNPGC
GPCMGNHQGI LAPGETCIST ANRNFKGRMG NKDSFIYLAS PLTVAASAVA GEIADPREVL
|
|---|
| |