| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1100 |
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| Symbol | |
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| ID | 8491088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 1113989 |
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| End bp | 1115245 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646359117 |
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| Product | 3-isopropylmalate dehydratase |
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| Protein accession | YP_003239076 |
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| Protein GI | 260892979 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00139] homoaconitase
[TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGCCAGA CCATAGCCGA AAAAATCCTC TCGCGAGCGG CGGGACGGCA GGTTCAGGCT
GGAGAGATCG TGGTGGCTCG GGTCGACCAG GTGATGGCCC AGGACGGCAC GGCACCTTTA
GCCATCCAGG TCTTCCGGCA AATGGGAGGG AAAAAGCCTT TTGATCCGGA AAGGGTTAAC
CTGGTCATCG ACCACAGTGC TCCCAGCCCT ACCGAAAGCA TCTCCAACCT GCACAAAATG
ATGCGGGAAT TCGCCTGGGA GCACGGCTGC CGCCTCTACG ACATAGGGGA CGGCGTTTGC
CACCAGGTCA TGGTGGAGAG TGGCCGGGTA GGTCCTGGGT GTGTGGTGGT AGGAGCGGAC
TCGCACACCT GCACCTATGG CGCTCTGGGA GCCTTCGCCA CCGGCGTGGG CTCTACTGAC
CTGGCGGCGG CTCTTATTTC TGGCCACCTC TGGTTCAAAG TACCCGAGAC CATAAAGGTC
GTCTGCCACG GTCCCTTGCC TCCCGGGGTC TTTGCCAAGG ACCTCATCCT CTACCTCATA
GGGAGGTTCA CCGCCGACGG AGCCACCTAC AAAGCGGTGG AGTACACGGG AAGCGCTATT
AAGGAGCTTT CTATGGAAGG GCGCTTCACG GTGGCCAATA TGGCGGTAGA GATGGGAGCC
AAAGTAGGGC TCATGGAGGT GGACGAAAAG ACCTGGGAGT GGTTAAAAGA GCACGGGGGC
GGGGAGTTTA CCGCCTTTTC TCCCGATCCC GATGCTGCTT ACGCTAAAGT GGTCGAGTTC
GACCTCACCT CTATATCTCC CCAGGTGGCC TGCCCTCACA GGGTGGACAA CGTCTCCCCC
ATCGAGAAGG TGGCGGGAAC CAAAATCGAC CAGGCCTTCA TCGGGACCTG TACCAATGGT
CGCTTGGAGG ATTTGCGCGT AGCAGCGCGG ATACTGGCGG GTAGGAAAAT ACATCCTAGG
GTGCGCCTGG TGGTAGCACC GGCCTCACGC AAGGTCTACC TACAGGCCAT GCGGGAGGGC
ATCTTGGCTA CCCTGGTGGA AGCGGGTGCG GCGGTGGTTA CGCCCGGTTG CGGCCCCTGC
GTGGGAACCC ACAACGGCGT GCCGGCGGAC GGCGAGGTAG TCGTTTCCAC CGCCAACCGC
AACTTTAAAG GGCGCATGGG GAACGCCAAG GCGGAAATCT ACCTGGCCTC TCCGGCCACC
GTGGCGGCCT CGGCCATCGC GGGAGAGATC ACCGATCCCC GACTATTCTT AAAGTAG
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| Protein sequence | MGQTIAEKIL SRAAGRQVQA GEIVVARVDQ VMAQDGTAPL AIQVFRQMGG KKPFDPERVN
LVIDHSAPSP TESISNLHKM MREFAWEHGC RLYDIGDGVC HQVMVESGRV GPGCVVVGAD
SHTCTYGALG AFATGVGSTD LAAALISGHL WFKVPETIKV VCHGPLPPGV FAKDLILYLI
GRFTADGATY KAVEYTGSAI KELSMEGRFT VANMAVEMGA KVGLMEVDEK TWEWLKEHGG
GEFTAFSPDP DAAYAKVVEF DLTSISPQVA CPHRVDNVSP IEKVAGTKID QAFIGTCTNG
RLEDLRVAAR ILAGRKIHPR VRLVVAPASR KVYLQAMREG ILATLVEAGA AVVTPGCGPC
VGTHNGVPAD GEVVVSTANR NFKGRMGNAK AEIYLASPAT VAASAIAGEI TDPRLFLK
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