| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_1906 |
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| Symbol | leuC |
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| ID | 3724596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 2220453 |
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| End bp | 2221733 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637751507 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_357317 |
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| Protein GI | 77919502 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit
[TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.0606993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACAGA CTATCGCACA GAAAATATTC GCAGCGCATT TGCGTGACGA ACCTTTTCCG
GGTACTTACG TTCTCGACCT GGACCGGGTT CTCTGTCATG AAATCACTAC CCCTGTCGCT
ATTGCCGATC TCGAGTGGCG GGGCAAGGAT CGGGTTTTCG ATCCATCTAA AATTAAAGCC
GTTATCGATC ATGTGACCCC GGCCAAGGAT ACCAAAACGG CCATTCAGGG TAAAATCCTG
CGCGAGTGGG CGCAACGTCA TGACATTCCC GACTTTTTCG ATATCGGTCA GAACGGTGTA
TGCCATGCGC TGTTCCCTGA AAAGGGGTTC ATCCGACCCG GTTACACGGT CATCATGGGG
GACAGTCATA CCTGTACCCA CGGAGCCTTC GGTGCTTTTG CCGCAGGTGT CGGGACCACC
GATCTGGAGG TCGGCATCCT CAAGGGGGTA TGTGCTTTTC GCAAGCCGCA GAGCATTCTG
GTCAATATTA CCGGTACCTT GCCCGAACAT GTGTATTCCA AAGACGTGAT TCTGCACATT
ATTCACAAGC TTGGCGTTAA TGGCGCTACC GATCACGTGC TCGAATTCCG TGGGCCCGTG
GTCGATGCCA TGTCCATGGA TGCTCGTATG ACCTTGACCA ACATGGCCAT CGAAGCCGGC
GGCACTTGCG GCATCTGTCT GCCGGATCAG GTGACTGTCG ATTATCTCTG GCCGTTTATC
TCGGAAGAAT ATGCCAGCAA GGAAGCGGCC CTCGCCGATT TTCGTAAGTG GCATTCCGAC
GCCGATGCCG AATACGCCAA GGTGCTCGAT ATCGACGTCA GCCAACTTGA GCCGCAGGTG
ACCTACGACT ATAAACCCGA TTGCGTCAAG ACCGCTCGGC AGATGGCCGG TACGCCTGTT
AATCAGGTTT ATATCGGTAC CTGTACCAAC GGTCGACTGG AGGATTTACG TCAGGCCGCG
GATATTCTCA AGGGGCATAA GCTGGCGCCC AATGTGCGAG GCATTCTCTC GCCGGGGACG
CCGAAAATTT TCCGCGAGGC CATGGAAGAA GGGATCCTTG CCACGTTTAT GGATGCCGGT
TTTTGTATTA CCAATCCCAC CTGCGGCGCC TGTCTCGGTA TGAGTAACGG CGTGCTTGCG
CCCGATGAAG CCTGTGCGGC TACCAGTAAT CGCAATTTCC AGGGGCGCAT GGGGCAAGGC
GGAATGGTCT ACCTTATGAG TCCGGCCACG GCTGCCGCCA CCGGTATTAA GGGAACCGTT
ACCGATCCGC GCGATCTTTA A
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| Protein sequence | MGQTIAQKIF AAHLRDEPFP GTYVLDLDRV LCHEITTPVA IADLEWRGKD RVFDPSKIKA
VIDHVTPAKD TKTAIQGKIL REWAQRHDIP DFFDIGQNGV CHALFPEKGF IRPGYTVIMG
DSHTCTHGAF GAFAAGVGTT DLEVGILKGV CAFRKPQSIL VNITGTLPEH VYSKDVILHI
IHKLGVNGAT DHVLEFRGPV VDAMSMDARM TLTNMAIEAG GTCGICLPDQ VTVDYLWPFI
SEEYASKEAA LADFRKWHSD ADAEYAKVLD IDVSQLEPQV TYDYKPDCVK TARQMAGTPV
NQVYIGTCTN GRLEDLRQAA DILKGHKLAP NVRGILSPGT PKIFREAMEE GILATFMDAG
FCITNPTCGA CLGMSNGVLA PDEACAATSN RNFQGRMGQG GMVYLMSPAT AAATGIKGTV
TDPRDL
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