Gene CCC13826_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_2194 
SymbolleuC 
ID5597008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp1782820 
End bp1784085 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content47% 
IMG OID640930322 
Product3-isopropylmalate dehydratase large subunit 
Protein accessionYP_001467598 
Protein GI157164713 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR01343] homoaconitate hydratase family protein
[TIGR02083] 3-isopropylmalate dehydratase, large subunit
[TIGR02086] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.454447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA CCATCACAGA AAAAATATTT TCAGATCACG TTGGCAAAGA GGTAAGCGCA 
GGAGAGATCA TCGAGAGCAA GATCGATATG ATCATAGGTA ACGACATCAC GACGCCTATC
TCGATCAAGC AGTTTGAGCG AAGCGGCGCT AAAAAGCTAG CTAACCCAGA CGGCTTTGCT
ATCGTGATGG ACCACTACAT CCCGACAAAG GACATCCTAA GCGCAAATCA AGCCAAAATT
TCACGCGAAT TTGCCTACAA ACACGACCTT AAAAACTATT TTGACGAAAA AGATATGGGC
ATCGAGCACG CGATTTTGCC TGAAAAAGGG CTAGTCATTC CAGGCGACGT CATCATCGGC
GCAGACAGTC ACACCTGTAC GCACGGCGCT CTTGGGGCAT TTAGCACCGG CATGGGTAGC
ACCGACCTAG CTTATGCGAT GATCACTGGC AAAAACTGGT TTAAAGTGCC TGAGAGTATC
AAAGTCGTCT TTAAAGGCAA GCTTGATAAG CACGTCTATG GCAAGGACCT CATCCTTGAG
ATCATCCGTC AAATAGGCGT TGATGGCGCA CTTTACAAGG CGCTTGAGTT TAGCGGCGAG
GTGATAGATG GCCTTAGCAT GGATGATAGA TTTTCAATGT GCAACATGGC GATCGAAGCT
GGCGCAAAGA GCGGCATCAT CGCGGTTGAT GAGATCACAA AAGAGTTTTT AAAAGATAAA
AATTTACGCG ATAAACCAAA ATTTTTCTAC TCAGACGAGG GCGCAAAATA CGACAAAATT
TTAGAGATCG ATGTCACAAA CCTTGATCCA GTCATCGCAT ATCCATTTTT GCCAAGCAAC
GGCAAGAGCG TAAGACAGGC GGTTCGCGAC GATCTAGCTA TCGATCAAGC ATTTATCGGC
TCATGCACAA ATGGCCGTCT AAGCGACCTT CGCATCGCAG CGCAAATCCT AAAAGGTAAA
AAAGTAGCCC GCAAAACAAG GCTCATCATC ACTCCAGCGA CGCAAAAGAT CGCAAGAGCT
GCTGAAAAAG AGGGGCTAAT CGACATTTTC ATAGAAGCTG GCGCAGTTGT GAGCAACCCA
ACATGTGGCG CTTGCCTTGG CGGATATATG GGCATTTTGG GCGCAAACGA GCGCTGCATA
TCGACTACAA ATAGAAATTT CGTCGGTCGT ATGGGCGATA GGACGAGTGA AATTTATCTA
GCTAACTCGG CGGTTGTGGC GGCGAGCGCG ATAGCAGGTA AAATCGCCGA TCCGCGTGAT
CTTTAG
 
Protein sequence
MKQTITEKIF SDHVGKEVSA GEIIESKIDM IIGNDITTPI SIKQFERSGA KKLANPDGFA 
IVMDHYIPTK DILSANQAKI SREFAYKHDL KNYFDEKDMG IEHAILPEKG LVIPGDVIIG
ADSHTCTHGA LGAFSTGMGS TDLAYAMITG KNWFKVPESI KVVFKGKLDK HVYGKDLILE
IIRQIGVDGA LYKALEFSGE VIDGLSMDDR FSMCNMAIEA GAKSGIIAVD EITKEFLKDK
NLRDKPKFFY SDEGAKYDKI LEIDVTNLDP VIAYPFLPSN GKSVRQAVRD DLAIDQAFIG
SCTNGRLSDL RIAAQILKGK KVARKTRLII TPATQKIARA AEKEGLIDIF IEAGAVVSNP
TCGACLGGYM GILGANERCI STTNRNFVGR MGDRTSEIYL ANSAVVAASA IAGKIADPRD
L