| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1053 |
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| Symbol | |
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| ID | 5207999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1291295 |
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| End bp | 1292560 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640594667 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_001275412 |
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| Protein GI | 148655207 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCAAA CGCTTGCAGA ACAGATCCTT TCACACGCTG CCGGGCGTCC GGTCTCCGCC
GGCGAGAATA TCGTCGCCAG GATTGATCTG GCGATGATGC ACGACAGCAT CTCACCGAGC
ATCATCAAAA TCCTGCACCA CGAATTGGGC GCCGAACGGG TGTGGGATCG CGACCGTGTG
GCAGTGGTGG TGGACCACGT TGCACCGGCG GCGACGATCC AGAATGCTGA GCATCAACTG
GCGCTGCGAC GGTGGGTGCG TCAGCAGCAG ATCACGCATT TCTTCGATGT CGGGCGCGGC
ATTTCGCATC CGGTACTGGT CGAGGAGGGG CTGGCGCGCC CCGGTATGCT GATCATCGGC
AGCGACTCGC ACTCAACGGC GTATGGCGCG GTCGGGGCGT TTGGCGCCGG CATGGGTTCC
ACCGATATGG CGCTGGCGCT GGCGACCGGG CAGACGTGGC TGCGTGTGCC GGAGACGGTG
CGCATCCTGG CGCGTGGGCG GTTTCAACCT GGGGTGGGCG CAAAGGATCT GGGGCTGCGC
GTAGCGCGTC TGATCGGCGC CGATGGCGCG ACCTATCAGT CGGTCGAGTG GCACGGCGTC
GAGGAATTGA GCATCGGCGA ACGGATGACG CTCGCCACGC TCTCTGTTGA AATCGGTGCG
AAGGCAGGGA TCATTCCGCC TGTCGGTCCC GGCTGGGAAG AGCACGCCAC CCGTCGCGGC
ATCACCGTCC CGTCATGGTT GCGCGTCGAA GAGGGAGCGC GCTACAGTCG CACCGTGGAG
GTCGATCTCG ACACCCTTGA GCCGCAGGTG AGCGTGCCGC ACTTCGTGGA CAATGTGCGT
GACCTGAGCG ATCTGGGGCG TGTTGAGGTG GATGTGGTCT ATATTGGCAC CTGCACGAAC
GGTCATGCGA ACGACCTTGC TGCTGCTGCG CGCATCCTGA AGGGGCGCAA AGTGGCGCGC
GGTGTGCGCC TGCTCGTGGT GCCGGCGTCG AGCGAAGCGT TGCAGCAGGC GACGGCGGAT
GGAACGCTGG CGACACTCCT TGAATCCGGC GCAGCCATTG GCACCCCTGG ATGCGGCGCA
TGTATCGGGC GGCATATGGG CGTCCTGGCG CCCGGCGAGG TCTGCCTGTT CACCGGCAAC
CGTAACTTCC GCGGGCGCAT GGGATCGCCG GAGGCGCAGA TCTACCTGGC GTCGCCTGAA
GTTGCAGCGG CGACGGCAGT GCTCGGGTAT ATCGCCCATC CGGCGGAGGT GGTGAACGGG
CGGTGA
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| Protein sequence | MGQTLAEQIL SHAAGRPVSA GENIVARIDL AMMHDSISPS IIKILHHELG AERVWDRDRV
AVVVDHVAPA ATIQNAEHQL ALRRWVRQQQ ITHFFDVGRG ISHPVLVEEG LARPGMLIIG
SDSHSTAYGA VGAFGAGMGS TDMALALATG QTWLRVPETV RILARGRFQP GVGAKDLGLR
VARLIGADGA TYQSVEWHGV EELSIGERMT LATLSVEIGA KAGIIPPVGP GWEEHATRRG
ITVPSWLRVE EGARYSRTVE VDLDTLEPQV SVPHFVDNVR DLSDLGRVEV DVVYIGTCTN
GHANDLAAAA RILKGRKVAR GVRLLVVPAS SEALQQATAD GTLATLLESG AAIGTPGCGA
CIGRHMGVLA PGEVCLFTGN RNFRGRMGSP EAQIYLASPE VAAATAVLGY IAHPAEVVNG
R
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