| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1030 |
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| Symbol | |
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| ID | 4057990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1100915 |
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| End bp | 1102210 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641230047 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_604498 |
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| Protein GI | 94985134 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000620705 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGAATGA CGATTGCGGA AAAGATTCTG GCGGCCCACA GCGGCCAGAA GGAAGTGGTG
CCCGGGCAAT TGATCGAGTG CGCGACCGAC TGGGTGCTGT GCCACGAGAT CACCACTCCC
GCCGCCCTGC GCATGCTTGA AGAACGCGGT ATGGACCGGG TGTTCGATCC GGAAAAGATC
GTGGCGGTGC CCGATCACTC CGTGCCCGCC ATGAACATCA AGGCGGCCAA GATGTACCAG
AAGCTCAAGT CCTGGGTGCA GGAAAAGGGG ATCCGGCACT TCTATGACGT GGGCCGCGGC
GGCATCGCCC ACGTCGTGCT GGAAAATACT GGTCTGATCA AGCCGGGGCA GACGCTCGTC
AGCGGCGACT CACATACCTG TAACGCCGGT GCGCTCGGCT GCTTTGCCAC GGGCGTGGGC
AGCACCGACC TCGCGGGGGC GATCTATGCG GGTAAAGTTT GGTTCAAGGT GCCCGAAACC
ATGCTGATCC GCGTGACGGG TGAGCTGCAG CCCGGCGTGA CGCCTAAGGA TCTGGTGCTC
GAAGTGATCC GGCGCATCGG CGCAGACGGC GCGAACTACC TGGTGATGGA GTGGGTCGGT
GACACCATCG AGCGGATGGA CATGGAGGGC CGCTTCACCC TGACGAACAT GGCGATCGAG
GCGGGGGGCA AGACCGGTAT CGTGGCCGTA GACGACACGA CGCGCGCGTA TATGGCGGCT
CGTGGCGTCA CCCCCGACCA GTACACCGAG TACACCTCTG ACCCCGACGC ACGGTACAAG
GTGGTGATTG ACCTCGATGC TTCCAAGGTG GAACCGACGG TCGCCTATCC GCATATCCCC
AGCAACGGGC GGGTGGCGGG TCAGGACCGT ATTCCCATCA CCCACGCCTA CGTCGGCAGT
TGCACCAATG GGCGCATCGG TGACCTGCGC GACGTGGCCC GCATCCTCAA GGGCCGCCGG
GTGGCGGACG GCGTGCAGAT GATTGTGGTG CCCGCGACCC AGGCGATCTG GAAGCAGGCT
GCGCAGGAAG GGCTGCTGGA AATCTTCGTG GAGGCGGGCG CGAGCGTGAG TTATCCCAGT
TGCGGCGCCT GTCTGGGCAT GCACTCGGGC GTGTTGGGAC CGGGCGACGT GTGCATTTCC
AGCTCCAACC GCAACTTCGT GGGCCGCATG GGCGACCCCA GCGCGCAGAT TTACCTCGCT
TCTCCCGCCA CCGTGGCGGC GAGTGCTGTG GCCGGGTACA TCAGCGACCC GCGCGAGTAC
AACCCGCAAG GGCAAGGAAC AGAAGCCGCG GATTGA
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| Protein sequence | MGMTIAEKIL AAHSGQKEVV PGQLIECATD WVLCHEITTP AALRMLEERG MDRVFDPEKI
VAVPDHSVPA MNIKAAKMYQ KLKSWVQEKG IRHFYDVGRG GIAHVVLENT GLIKPGQTLV
SGDSHTCNAG ALGCFATGVG STDLAGAIYA GKVWFKVPET MLIRVTGELQ PGVTPKDLVL
EVIRRIGADG ANYLVMEWVG DTIERMDMEG RFTLTNMAIE AGGKTGIVAV DDTTRAYMAA
RGVTPDQYTE YTSDPDARYK VVIDLDASKV EPTVAYPHIP SNGRVAGQDR IPITHAYVGS
CTNGRIGDLR DVARILKGRR VADGVQMIVV PATQAIWKQA AQEGLLEIFV EAGASVSYPS
CGACLGMHSG VLGPGDVCIS SSNRNFVGRM GDPSAQIYLA SPATVAASAV AGYISDPREY
NPQGQGTEAA D
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