| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2485 |
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| Symbol | |
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| ID | 7259456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2684224 |
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| End bp | 2685498 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643562371 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_002458949 |
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| Protein GI | 219668514 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02083] 3-isopropylmalate dehydratase, large subunit
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.836058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGATA TGGCAATGAC CATCACTGAG AAAATTCTTG CCGAGCATGC CGGTCTGGAT
AAGGTGGTAC CCGGTCAATT GATTACTGCC CAGCTGGATC TGGCCTTGGC CAATGATATA
ACCGGCCCGG TCTCCATCCG GGAATTTGAG AAGTTCGGTG TGGAAACCGT TTGGGATAAG
ACCAAGGTCG CCTTGGTTCC CGACCACTTT ACCCCCAACA AAGACATCGC TTCTGCAGAA
TTAAGCAAAG CTTTAAGAGA ATTTGCAAAA AAACAAGGGA TTGTTCATTA TTGGGAGCAG
GGAAGAGTGG GTGTTGAGCA CTGTCTTCTT CCTGAGCAAG GCGTGACCCT GCCCGGTGAT
GTGATCATCG GTGCCGATTC CCATACCTGC ACCTACGGCG CTTTGGGTGC TTTTGCAACA
GGAGTGGGCA GCACAGATTT AGCCGCCGGC ATGGCTACCG GGGAAGCCTG GTTCAGAATT
CCGGAATCCA TAAAATTCAT ATTTAAAGGA ACGAACTTCC AGCCCTGGGT CAGCGGTAAA
GATTTGATTC TTTACACCAT CGGCAAAATC GGGGTGGACG GCGCCCGCTA TCGGTCTATG
GAATTCACTG GGGAAGGTAT CGCCGCCTTG TCCATGGACG GCCGTTTAAC CATGTGCAAT
ATGGCTGTGG AAGCGGGAGC CAAGAACGGG ATTATCCCGC CCGATGAAAA GACCCTGGCT
TATGTGAATG AACGGGCCAA ACGCCCCTAT AAAGTCTATC ACAGCGATCC CGATGCTCAG
TATGTGGAAG TCTATGAATG GGATGTGGCA GATATTCCTT TGCAAGTGGC TTTTCCTCAT
CTGCCGGAGA ACGCCAAACC CGTCAGTGAA GGGAAAGGAA TTAAAATCGA TCAAGTGGTC
ATCGGTTCCT GTACTAATGG CCGTCTGGAA GATATGCAAG TGGCGGCACA GATCCTCAAG
GGCCAAAAAG TCCATGGGGA TGTACGCTTA ATTGTCATAC CTGGAACTCA GGATATTTAT
AAGCAAGCCA TGCAGGAAGG ACTGATCGAT ATCTTTATCG ATGCGGGGGC TGTGGTCAGC
ACTCCTACCT GCGGACCTTG CTTGGGCGGA TATATGGGAA TTCTGGCCAA AGGGGAGCGG
GCGCTTTCCA CCACCAACCG GAACTTTGTC GGACGGATGG GACATCCGGA AAGTGAGGTC
TACCTGTCCG GACCGGCTGT GGCGGCAGCA TCGGCAGTAA CCGGGGAAAT CTCACATCCA
GAGGAGGTAT TATAA
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| Protein sequence | MRDMAMTITE KILAEHAGLD KVVPGQLITA QLDLALANDI TGPVSIREFE KFGVETVWDK
TKVALVPDHF TPNKDIASAE LSKALREFAK KQGIVHYWEQ GRVGVEHCLL PEQGVTLPGD
VIIGADSHTC TYGALGAFAT GVGSTDLAAG MATGEAWFRI PESIKFIFKG TNFQPWVSGK
DLILYTIGKI GVDGARYRSM EFTGEGIAAL SMDGRLTMCN MAVEAGAKNG IIPPDEKTLA
YVNERAKRPY KVYHSDPDAQ YVEVYEWDVA DIPLQVAFPH LPENAKPVSE GKGIKIDQVV
IGSCTNGRLE DMQVAAQILK GQKVHGDVRL IVIPGTQDIY KQAMQEGLID IFIDAGAVVS
TPTCGPCLGG YMGILAKGER ALSTTNRNFV GRMGHPESEV YLSGPAVAAA SAVTGEISHP
EEVL
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