| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2987 |
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| Symbol | |
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| ID | 4458677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3689458 |
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| End bp | 3690717 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639703759 |
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| Product | 3-isopropylmalate dehydratase, large subunit |
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| Protein accession | YP_847096 |
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| Protein GI | 116750409 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02083] 3-isopropylmalate dehydratase, large subunit
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0958791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGA CCATCAGTGA AAAAATCCTG GCCAGGCACT CGGGCAAATC GACGGTCCTT
CCCGACGACC TGATCGAAGC CGGCATCGAT TTCGCTCTGG GAAACGATAT CACCGCGCCG
CTGGCGATCG AGGCGTTTCG CAAGGTTGGG GCCTCGCGCG TTTTCGACCC GGAGCGTATT
GCCCTCGTTC CCGACCACTT TGCGCCCAAC AAGGACATCG CCTCGGCCAT GCAGTGCAAG
ATCCTGCGGG ACTTTGCACG GGAATGGAAC CTCACGCACT ACTTCGAAGT GGGCCGGATG
GGGGTTGAAC ACGCGCTGCT TCCGGAACAG GGGCTGGTGC TTCCGGGTGA CGTCGTCATC
GGTGCGGACA GTCACACCTG CACCTATGGC GCACTGGGCG CGTTCGCCAC GGGAGTGGGC
AGCACGGATC TCGCGGCGGC GATGATCACG GGACGGGTCT GGTTCAAGGT GCCCTTTTCC
ATGAAGTTCG TGTACCGGGG CAAGCTCGGG CCGTGGGTGG GGGGAAAGGA TCTCATCCTG
TACACCATCG GACAGATCGG AGTGGACGGG GCCCGCTATC GAGCCATGGA GTTCACGGGG
GAGGTCATCG ACCGGCTTCC GATGTCGGAC CGCTTCTCCA TGTGCAACAT GGCCATCGAA
GCGGGCGCCA AGGCGGGCAT CATAGCCCCC GATCCCGTCA CCGAGGAATA TGTGAAGGGG
CGGGCCAAAA GATCCTATGA ATTCTATCGG AGCGATCCCG ATGCGGCCTT CGAATCCGTC
CATGAATGGG ACGTTTCCGC GTTCGAGCCC ATGGTAGCGC TCCCGCACTC GCCCGCCAAC
GTTCGTCCGG TTTCCCGGAT CCCGCGGACG GTCATCGATC AGGTGGTGAT CGGTTCCTGC
ACCAACGGGC GCTACGAGGA TCTCGAAACG GCCGCCGCAA TCCTCAAGGG CAGGAAGGTC
GCCCCCGGGG TACGCTGCAT GATTATTCCG GCAACCCGGG AGATCTACCG GCAGGCCCTG
AGAAACGGGT TGCTCGAGAC TTTCGTGGAC GCGGAAGCCG CGGTGAGCAC CCCCACCTGC
GGCCCCTGTC TCGGCGGTCA CATGGGAATC CTGGCCGCCG GCGAAAAGGC CGTGGCGACC
ACGAACCGCA ATTTCCTGGG TCGCATGGGC CACGCCGAAA GCGAAATCTA TCTGAGCAAT
CCGGCGGTGG CGGCGGCTTC GGCCGTTGCG GGACGAATCG TCCATCCGGA TGAACTGTAG
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| Protein sequence | MPMTISEKIL ARHSGKSTVL PDDLIEAGID FALGNDITAP LAIEAFRKVG ASRVFDPERI
ALVPDHFAPN KDIASAMQCK ILRDFAREWN LTHYFEVGRM GVEHALLPEQ GLVLPGDVVI
GADSHTCTYG ALGAFATGVG STDLAAAMIT GRVWFKVPFS MKFVYRGKLG PWVGGKDLIL
YTIGQIGVDG ARYRAMEFTG EVIDRLPMSD RFSMCNMAIE AGAKAGIIAP DPVTEEYVKG
RAKRSYEFYR SDPDAAFESV HEWDVSAFEP MVALPHSPAN VRPVSRIPRT VIDQVVIGSC
TNGRYEDLET AAAILKGRKV APGVRCMIIP ATREIYRQAL RNGLLETFVD AEAAVSTPTC
GPCLGGHMGI LAAGEKAVAT TNRNFLGRMG HAESEIYLSN PAVAAASAVA GRIVHPDEL
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