| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0621 |
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| Symbol | |
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| ID | 5170608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 619419 |
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| End bp | 620675 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640563128 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_001244217 |
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| Protein GI | 148269757 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0188797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAGA CACTCGCAGA AAAGATCTTT TCTGAACATA CTGGAAGAGA CGTGAAAGCC
GGAGAAATCG TACTCGCGAG AGTGGATATA GCCATGGCCC AGGATGGAAC AGGCCCCCTG
ATGATAAACG AATTCAGAGA ACTCGGCTTC AAAGAAGTGA AGGTCCCGAA GGCCTTCCTC
TTCATCGATC ACGCTTCTCC GAGCCCGAGG AAAGAGCTTT CGAATTCGCA GAAGATGATG
AGAGAATTTG GAAAAGAGAT GGGAGTCAAG GTTTTCGATG CGGGAGACGG GATATCCCAC
CAGATCCTCG CGGAAAAATA CGTGAAACCC GGCGATCTGG TAGCAGGTGC GGATTCGCAC
ACCTGCACTG CCGGTGGGCT CGGTGCTTTC GGAACGGGAA TGGGGTCCAC AGATGTTGCG
ATCATCTTCG GGCTTGGACA GAACTGGTTC AAAGTACCTG AGACGATCAA GGTTGTGGTG
AACGGGAAGT TACAGGATGG AGTTTACGCG AAAGACATCA TTCTCGAGAT CGCGAGAATT
CTGGGAAGCG ACGGCGCAAC TTACAAAGCG TTGGAGTTCC ATGGAAGCTG TATCGAAAAT
ATGAATGTGG AGGACAGACT CACCATTTCC AACATGGCGG TGGAAGTGGG AGCGAAAGCA
GGTCTCATGC CTTCTGATGA GAAGACCAGA GAGTTCCTGA AAAAGATGGG AAGAGAGGAG
GACTTCAGAG AGTTGAAAGC AGATCCAGAC GCGGTTTACG AGACAGAGAT AGAGATAGAT
GCCGACACAC TCGAACCACT CGTCTCTTTG CCTCACTATG TGGACAACGT GAGAAAGGTG
AGCGAGGTTG AAAAGGAAAA GATAAAGATA GATCAAGTGT TCATAGGAAC CTGTACGAAC
GGAAGACTTC AGGATCTTGA GATCGCTTTG AAAATTCTTG AGAAACACGG AAAGCACCCG
GATGTGAGGC TGATCGTCGG CCCCGCTTCA AGGAAGGTCT ACATGGACGC CCTTGAAAAG
GGAATAATCA AGAAATTTGT TGAACTCGGA GCGGCAGTTA TACCACCAGG TTGCGGCCCA
TGTGTTGGAA TCCACATGGG TGTTCTTGGA GACGGAGAGA GGGTACTTTC CACGCAGAAC
AGAAACTTCA AGGGAAGGAT GGGGAATCCC AATGCGGAGA TATACCTTGC TTCTCCTGCA
ACGGCGGCAG CCACCGCGGT AACCGGATAC ATCACAGATC CAAGAAGATT CATTTGA
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| Protein sequence | MGKTLAEKIF SEHTGRDVKA GEIVLARVDI AMAQDGTGPL MINEFRELGF KEVKVPKAFL
FIDHASPSPR KELSNSQKMM REFGKEMGVK VFDAGDGISH QILAEKYVKP GDLVAGADSH
TCTAGGLGAF GTGMGSTDVA IIFGLGQNWF KVPETIKVVV NGKLQDGVYA KDIILEIARI
LGSDGATYKA LEFHGSCIEN MNVEDRLTIS NMAVEVGAKA GLMPSDEKTR EFLKKMGREE
DFRELKADPD AVYETEIEID ADTLEPLVSL PHYVDNVRKV SEVEKEKIKI DQVFIGTCTN
GRLQDLEIAL KILEKHGKHP DVRLIVGPAS RKVYMDALEK GIIKKFVELG AAVIPPGCGP
CVGIHMGVLG DGERVLSTQN RNFKGRMGNP NAEIYLASPA TAAATAVTGY ITDPRRFI
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