| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0583 |
|---|
| Symbol | |
|---|
| ID | 8414869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 738098 |
|---|
| End bp | 739366 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645023556 |
|---|
| Product | 3-isopropylmalate dehydratase, large subunit |
|---|
| Protein accession | YP_003180957 |
|---|
| Protein GI | 257790351 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
|---|
| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02083] 3-isopropylmalate dehydratase, large subunit
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00310931 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGTC CCATGACCAT GGCGGAGAAG ATCCTCGCCG CCCATGCGGG GCTCGACGAA
GTGGAGCCGG GTCAGCTGAT CGAATGCGAT CTCGACCTCG TGCTGTCCAA CGACGTCACC
GCCCCCATTG CCGTCAAAGA GTTCCGCAAG ATCGGCGTCG AGAAGGTGTT CAATCCTACG
AAGATCGCTC TCGTCCCCGA TCACTACGTC CCCAACAAGG ACATCAAGAG CGCCGAGCAG
GCCAAGATCG TGCGCGATTT CGCGCGCGAG CAGGGTATCA CCCACTACTA CGAGGTGGGC
TGCATGGGCG TCGAGCATGC GCTGCTCCCC GAGCAGGGCG TCGTCGGCGC GGGCGACCTC
ATCATCGGCG CGGACAGCCA CACCTGCACG TACGGCGCGC TGGGCGCGTT CGCCACGGGC
GTGGGCTCCA CCGACGCCGG TGTGGGCTAC GCCACCGGCA AGGCGTGGTT CAAGGTGCCC
GAGTCTCTGC TGTTCAAGAT CGAGGGCGAG CTGGCTCCCG GCGTCACCGG CAAGGACGTC
ATCCTGCACA TCATCGGCAT GATCGGCGTG GACGGCGCGC TCTACCAGGC CATGGAGTTC
ACCGGCAGCG CCATCCGCGC CATGGACATG GACGAGCGCA TGAGCATCTC GAACATGGCC
ATCGAGGCGG GCGGCAAGGC CGGGCTCATC GAGGTCGACG ACGTGACGCG CGCCTACCTG
GACGGCCGCA CCGAGCGCCC CTACACCGAG TACCATTCCG ACGCGGACGC GACGTATGCG
AAGGTGTACG AGATCGACGC CGCCTCCATC GTGCCCACCG TGTCGTTCCC GCACCTGCCG
TCGAACACGC GCCCGGCCGC CGAGGCGCGC GACGTCAAAA TCGATCAGGC CGTCATCGGC
AGCTGCACGA ACGGCCGCAT CGCCGACATG CGCCAGGCCG CCGACGTGCT GCGCGGCCGC
ACGGTGCATC CCGACGTGCG CTGCATCGTG ATCCCCGCCA CGCAGGCGGT GTATCGCCAG
TGCATGGAGG AAGGCCTCAT GGACGTGTTC CTCGACGCGA ACTGCGCCGT GTCCACGCCT
ACGTGCGGCC CCTGCCTGGG CGGCTACATG GGCATTCTCG CCGCAGGCGA GCGCGCCATC
GCCACGACGA ACCGCAACTT CGTCGGCCGC ATGGGCGACC CCACCAGCGA GGTGTACCTG
TCCTCGCCGG CCATCGCCGC GGCAAGCGCC GTGCTCGGCC ACATCGGCCT GCCGGAAGAC
CTGGACTAG
|
|---|
| Protein sequence | MPRPMTMAEK ILAAHAGLDE VEPGQLIECD LDLVLSNDVT APIAVKEFRK IGVEKVFNPT
KIALVPDHYV PNKDIKSAEQ AKIVRDFARE QGITHYYEVG CMGVEHALLP EQGVVGAGDL
IIGADSHTCT YGALGAFATG VGSTDAGVGY ATGKAWFKVP ESLLFKIEGE LAPGVTGKDV
ILHIIGMIGV DGALYQAMEF TGSAIRAMDM DERMSISNMA IEAGGKAGLI EVDDVTRAYL
DGRTERPYTE YHSDADATYA KVYEIDAASI VPTVSFPHLP SNTRPAAEAR DVKIDQAVIG
SCTNGRIADM RQAADVLRGR TVHPDVRCIV IPATQAVYRQ CMEEGLMDVF LDANCAVSTP
TCGPCLGGYM GILAAGERAI ATTNRNFVGR MGDPTSEVYL SSPAIAAASA VLGHIGLPED
LD
|
|---|
| |