| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1458 |
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| Symbol | |
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| ID | 8419287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1686621 |
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| End bp | 1687880 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645038033 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_003198323 |
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| Protein GI | 258405581 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00139] homoaconitase
[TIGR01343] homoaconitate hydratase family protein
[TIGR02083] 3-isopropylmalate dehydratase, large subunit
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.888399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.260054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCACA CTGTAGCGGA GAAGATTTTA CAGCAACACA CACAGGATAC GGTCAGCGAG
CCCGGACAGA TCGTTCGCTG CGAGATTTCC CTGGCCCTGG CGAACGATAT CACCGCGCCC
CTGTCCATCC GGTCTCTGGA GAAAATGGGC GCGACCCGGG TCTTCGACAA AGACCGGGTC
GCCCTGGTCT GTGACCATTT TACGCCCAAC AAGGATATCG ATTCCGCCGA GCAGGTCCGC
ATCGTTCGCG AATTTGCGCG CAAGATGGGC ATTACCCATT ATTACGAAGG CGGTGAGGTC
GGGGTGGAAC ACGCCCTGTT GCCGGAACTC GGCCTGGTCG GTCCCGGGGA TATCGTTGTT
GGTGCGGACA GTCATACGTG CACCTACGGC GGTCTCGGTG CCTTTGCCAC CGGCCTCGGC
AGTACCGACG TCGCCGGGGC AATGGCCCTG GGAGAAACCT GGTTCAAGGT CCCGCCCACC
ATCCGGGTCG ATGTCAACGG CGACCTGGGG CGCTTTGTCG GCGGCAAGGA TATCATTTTG
CATTTGATTG GCACCATTGG AGTGGACGGA GCGTTGTACA AGGCCCTGGA ATTCGGCGGC
GGCACTGTCA GGGATCTCGA TCTCGAGGCC CGGTTGACCA TCGCTAATAT GGCCATTGAG
GCCGGCGGCA AGGTCGGCCT GTTCCCGGCG GATCAGACAA CGCTGGATTA CCTCCAAGCC
CACGGGCGCA GCGGCGATAC CTTTCTGGAA GCCGACGAGG GGGCAGGATA TGAGCGCCGG
GTGGCCATTG ACGCTGCCTC CCTGCAACCC CAGGTCGCCT GCCCCCATTT GCCGGAAAAT
GTCCATCCCG TGCGCGATGT AGGGGATATT CCCCTGGACC AGGTGGTCAT CGGTTCCTGC
ACGAACGGCC GGATCAGCGA TTTGCGCGAG GCCGCGGAAC TGCTCAAGGG CAAAAAGGTG
GCCAAGGGGC TGCGTCTGAT CATTCTTCCA GCTACCCCGG GCATTTATCG CCAAGCTCTG
GAGGAGGGAC TGATGACCAC GTTCATGGAA GCCGGGGCCA TTGTCGGCCC GCCCACCTGC
GGTCCCTGCC TTGGTGGGCA CATGGGGATT TTGGCCCAGG GCGAGCGGGC TCTGGCGACA
ACGAACCGCA ATTTCCGAGG ACGGATGGGC AGTCTGGAAA GCGAAGTCTA CCTGAGCGGG
CCGTCGGTGG CGGCAGCCAG TGCGGTGACT GGACGGATCA GCCATCCCGA AGATCTCTAG
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| Protein sequence | MRHTVAEKIL QQHTQDTVSE PGQIVRCEIS LALANDITAP LSIRSLEKMG ATRVFDKDRV
ALVCDHFTPN KDIDSAEQVR IVREFARKMG ITHYYEGGEV GVEHALLPEL GLVGPGDIVV
GADSHTCTYG GLGAFATGLG STDVAGAMAL GETWFKVPPT IRVDVNGDLG RFVGGKDIIL
HLIGTIGVDG ALYKALEFGG GTVRDLDLEA RLTIANMAIE AGGKVGLFPA DQTTLDYLQA
HGRSGDTFLE ADEGAGYERR VAIDAASLQP QVACPHLPEN VHPVRDVGDI PLDQVVIGSC
TNGRISDLRE AAELLKGKKV AKGLRLIILP ATPGIYRQAL EEGLMTTFME AGAIVGPPTC
GPCLGGHMGI LAQGERALAT TNRNFRGRMG SLESEVYLSG PSVAAASAVT GRISHPEDL
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