Gene Moth_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_2254 
Symbol 
ID3830749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp2357722 
End bp2358987 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content62% 
IMG OID637830174 
Product3-isopropylmalate dehydratase large subunit 
Protein accessionYP_431084 
Protein GI83591075 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR01343] homoaconitate hydratase family protein
[TIGR02083] 3-isopropylmalate dehydratase, large subunit
[TIGR02086] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGA CCATCACCGA AAAGATCCTG GCCGCCCACG CCGGATTAAA GGCGGTAGAG 
CCTGGCCAGC TCATCAACGC TAAAGTAGAC CTGGCCCTGG GGAACGATAT CACCGCCCCC
CTGGCCATCC AGGAGTTCAA AAAGCTCGGA GTGAAAAAAG TCTTCGACCC GGAGCGGGTC
GTCCTGGTAC CGGACCACTT CACCCCGGCC AAGGACATTA AGTCCGCCGA GCAGGCGAAA
ATCTTGCGCG ATTTCGCCCG GGAGCAGGGC TTGACCCACT ACTTTGAAAT CGGCCGTATG
GGCATCGAGC ACTGCCTGCT GCCGGAGGCG GGCCTGGTCG GTCCCGGAGA CCTGGTCATC
GGTGCCGACT CCCATACCTG CACCTACGGG GCCCTCGGGG CCTTCGCCAC CGGCGTCGGC
TCCACGGACC TCGCCGCCGC CATGGCCACC GGCGAGCTAT GGTTTAAAGT ACCCGAGACC
ATTCTCTTCC GTTACCACGG GAAGCTTAAG CCCTGGGTAG GCGGCAAAGA CCTCATCCTC
TACACCATCG GCCGGATCGG CGTCGACGGC GCCCGCTATA TGGCCATGGA ATTCACCGGC
GAAGCCATTA CCAACCTCTC CATGGAAGGC CGCTTCACCA TGGCCAACAT GGCCATCGAA
GCCGGCGGCA AGAACGGCAT CTTCCCGGTG GACGAAAAGA CCGTAGAATA CATCCGGGGC
CGGCTGCAAA GGGACTACCG CATCTACCAG AGCGACCCCG ACGCCCGTTA CAATCAGGAG
ATAGACATCG ACGCCAGTAA GATCGAACCC CAGGTAGCCC TGCCCCACCT GCCCGAAAAC
GCCCGGAGTG TAAAAGAAAT AGGAGAGATC AAAATCGACC AGGTAGTCAT CGGCAGCTGC
ACCAACGGCC GCCTGGAGGA CCTGCGGGTG GCGGCGCAAA TCCTAAAGGG GCAAAAGGTC
CATCCCGAAG TAAGACTCAT TGTCATCCCC GGCACCCAGC AGATCTACGC CGCAGCCCTG
GCCGAAGGGT TGATAGCAAC CTTTATCGAA GCCGGGGCGG CCGTATCCAC CCCCACCTGC
GGCCCCTGCC TGGGCGGGCA TATGGGGATC CTGGCTAAAG GGGAGCGGGC CCTGGCCACC
ACCAACCGCA ACTTCGTCGG CCGCATGGGC CATCCCGAGA GCGAAGTCTA TCTCGCCGGC
CCGGCGGTAG CCGCCGCCAG CGCCGTTAAA GGGCGCATCG CCGCCCCAGA GGAGGTAGTA
AAATGA
 
Protein sequence
MGMTITEKIL AAHAGLKAVE PGQLINAKVD LALGNDITAP LAIQEFKKLG VKKVFDPERV 
VLVPDHFTPA KDIKSAEQAK ILRDFAREQG LTHYFEIGRM GIEHCLLPEA GLVGPGDLVI
GADSHTCTYG ALGAFATGVG STDLAAAMAT GELWFKVPET ILFRYHGKLK PWVGGKDLIL
YTIGRIGVDG ARYMAMEFTG EAITNLSMEG RFTMANMAIE AGGKNGIFPV DEKTVEYIRG
RLQRDYRIYQ SDPDARYNQE IDIDASKIEP QVALPHLPEN ARSVKEIGEI KIDQVVIGSC
TNGRLEDLRV AAQILKGQKV HPEVRLIVIP GTQQIYAAAL AEGLIATFIE AGAAVSTPTC
GPCLGGHMGI LAKGERALAT TNRNFVGRMG HPESEVYLAG PAVAAASAVK GRIAAPEEVV
K