| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0476 |
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| Symbol | |
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| ID | 6331482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 488066 |
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| End bp | 489361 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642656765 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_001930671 |
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| Protein GI | 188996420 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00139] homoaconitase
[TIGR01343] homoaconitate hydratase family protein
[TIGR02083] 3-isopropylmalate dehydratase, large subunit
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0146744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTATGA CAATAACTGA AAAAATAATA GCAGCACACG CCGGTAGAGA TTATGTAGAA
CCGGGAGAGC TTGTAACTGT TAAAGTAGAC CTTGCTATTG CAAACGATAT TACAGCTCCG
CTTGCAATAA AACAGCTTGA AAAATACGGC ATAGATAAAG TTCATGACCC AAATAAAATT
GCTCTTGTTA TGGACCATTT CTTCCCGCCA AAAGACATTA TGTCTGCTCA GCAGATTAAA
ATCTCAAGAG ATTTTGCTAA AAAAATGGGA ATTAAAAACT ACTTTGAAGG TCAAGATAGT
GGAGTAATGC ATACACTACT TCCAGAAAAA GGTTTTGTAG TTCCGGGTGA TTTGGTAATT
GGTGCAGATT CACATACATG TACTTACGGC GGAATTGGTG CATTTTCTAC AGGTGTAGGT
TCTACTGATA TTGCCTATAT ATGGGCTACA GGTGAAACAT GGCTTAGAGT TCCAGAAAGT
ATGAAGTTTG TATTTTATAA TAAACCACAA AAATGGGTTG GTGGAAAAGA TTTTGTTTTA
ACAGTAATTG GAAAAATTGG TGTTGATGGT GCATTGTATA AAGCTATGGA ATATCAAGGA
GAAGCAATCA GAGCTCTTGA TATAGATAAC AGACTTACAA TCGCTAATAT GGCTATAGAA
GCAGGTGGAA AAAGTGGTAT TATTGAACCA GATGAAAAAA CTGTTGACTG GGTAAGAAAA
AGAACAAATA GAGAGTTTAA ACTCTATAAA TCAGACCCGG ACGCTAAATA CTGCTGTGAG
TATGAATTTG ATGCAAGTAA AATAGAGCCT GTAGTTGCAT GTCCGAGCTT ACCATCAAAC
GTAAAACCTG TTAGTGAAGT AGCCGGAACG CACATTGACC AAGTATTTAT TGGCTCATGT
ACAAATGGAA GACTTTCAGA CCTAAGAATA GCAGCAGCAA TTTTAAAAAG TAAAAAAGTT
CATCCAGAAG TTAGATGTAT TGTAATACCT GCATCAGACC AAATTTATAA ACAAGCATTA
CATGAAGGTA TAATTGAAAT ATTGGCAGAT GCGGGATGTT TGATAAGCAC ATCTACATGT
GGTCCATGTC TTGGTGGTCA TATGGGTATT CTTGCAGAGG GTGAGGTTTG TTTGTCTACA
TCAAACAGAA ACTTTGTGGG AAGAATGGGA CATCCGAAAA GCCAAGTATA CTTATCAAGC
CCAGCAGTAG CTGCGGCGTC AGCGGTTCTT GGCAGAATTG CACATCCTGA TGAAGTTGCA
AAATACGAAG AAGTTGAAAC ACTTATAACT TTATAA
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| Protein sequence | MGMTITEKII AAHAGRDYVE PGELVTVKVD LAIANDITAP LAIKQLEKYG IDKVHDPNKI
ALVMDHFFPP KDIMSAQQIK ISRDFAKKMG IKNYFEGQDS GVMHTLLPEK GFVVPGDLVI
GADSHTCTYG GIGAFSTGVG STDIAYIWAT GETWLRVPES MKFVFYNKPQ KWVGGKDFVL
TVIGKIGVDG ALYKAMEYQG EAIRALDIDN RLTIANMAIE AGGKSGIIEP DEKTVDWVRK
RTNREFKLYK SDPDAKYCCE YEFDASKIEP VVACPSLPSN VKPVSEVAGT HIDQVFIGSC
TNGRLSDLRI AAAILKSKKV HPEVRCIVIP ASDQIYKQAL HEGIIEILAD AGCLISTSTC
GPCLGGHMGI LAEGEVCLST SNRNFVGRMG HPKSQVYLSS PAVAAASAVL GRIAHPDEVA
KYEEVETLIT L
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