| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1949 |
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| Symbol | |
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| ID | 4847916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1942842 |
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| End bp | 1944095 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640116655 |
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| Product | homoaconitate hydratase family protein |
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| Protein accession | YP_001047857 |
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| Protein GI | 126179892 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCGA CTATCGCAGA AAAGGTATTT TCGCAACGGT GCGGGAGATC CGTCCGCGCG
GGAGAGGTGG TGATGGCACC AGTGGATGCA GCGATGATCC ACGATATCAC CGGCCCGCTT
GCGGTCAGGG TCTTTCGCGA GATGGGTGGA GAGCGCGTAT TCGATCCCGA ACGGATTATT
ATGCTCTTCG ACCACCAGGT ACCCGCCGAC TCGATTCCCG CCGCCGAGAA CCACGTCTTC
ATGCGCCGGT TTGCGGATGA GCAGGGGATC CACAACTACG ACCTCCTCGA GGGCGTCTGC
CACCAGGTCG TGATGGAGAA AGGGCGGGCG GCGCCGGGTG AGATCATCGT CGGGACCGAC
TCGCACACCT GCACCTACGG TGCGGCGGGG GCGTTTGCGA CCGGCATCGG TTCGACCGAT
ATGGGGTTCG TCCTGAAGTT CGGGGCGCTC TATTTCCGGG TGCCCGAGAG CATCCGGATC
GAGGTCGAGG GCGCGTTCGG CCGGAGGGTC GGGGCGAAAG ACCTGATCCT CTCTCTCGCC
GGCGACATCG GCGCGGACGG GGCGACCTAC ATGGCGCTCG AGTTCACCGG TGATGCCATG
CACACCATGA ACATGGCGGG CCGGATGACC TGCGCGAACA TGGCGATAGA GATGGGGGCG
AAGGCCGGGA TCGTGACGCC CGACGCGGCC ACCTGGGACT ACGTCGCCGC CCGACGTGAT
ATCGAGCCGT TCGACCTCGC GGGCGATCCG GACGCGGAGT ACCGGGAGCG GCGGCACTAC
GACGTCACTG ACCTCGCCCC GCAGGTCGCC GTCCCGCACA ACGTCGACAA CGTCGTGGAT
GTCGGAAAGG TCGCGGGAAC AAAGGTCGAC CAGGTCTTCA TCGGCTCCTG CACGAACGGC
CGCTACGAGG ACCTTGCCGA GGCGGCGGAG GTGCTCGGGA ACGCCGACCG GTTCGCCGAC
GGCGTCCGGG TGATCGTGAT CCCGGCCTCG CGAACGGAGT ACCTCAAGGC CCTCCGGGGG
GGGCTGATCG AGCGGTTCGT CGAGGCGGGC GCGCTCGTCG AGGCGCCGTG CTGCGGCCCC
TGCATGGGCG GGGCGTTCGG CCTCCTCGCC CCCGGCGAGG TCTCGCTCTC GACGTCGAAC
CGGAACTTCC GGGGCAGGCA GGGGAGTGCG CAGGCGTCGG TCTACCTCTC CTCGCCGGCG
ACGGCGGCGG CGAGCGCCCT CTACGGCGAG ATCACCGACC CGAGGGAGGT GTGA
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| Protein sequence | MSATIAEKVF SQRCGRSVRA GEVVMAPVDA AMIHDITGPL AVRVFREMGG ERVFDPERII
MLFDHQVPAD SIPAAENHVF MRRFADEQGI HNYDLLEGVC HQVVMEKGRA APGEIIVGTD
SHTCTYGAAG AFATGIGSTD MGFVLKFGAL YFRVPESIRI EVEGAFGRRV GAKDLILSLA
GDIGADGATY MALEFTGDAM HTMNMAGRMT CANMAIEMGA KAGIVTPDAA TWDYVAARRD
IEPFDLAGDP DAEYRERRHY DVTDLAPQVA VPHNVDNVVD VGKVAGTKVD QVFIGSCTNG
RYEDLAEAAE VLGNADRFAD GVRVIVIPAS RTEYLKALRG GLIERFVEAG ALVEAPCCGP
CMGGAFGLLA PGEVSLSTSN RNFRGRQGSA QASVYLSSPA TAAASALYGE ITDPREV
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