More than 300 homologs were found in PanDaTox collection
for query gene BMA10229_1814 on replicon NC_008835
Organism: Burkholderia mallei NCTC 10229



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008835  BMA10229_1814  spermidine/putrescine ABC transporter, permease protein  100 
 
 
167 aa  330  5e-90  Burkholderia mallei NCTC 10229  Bacteria  normal  0.272424  n/a   
 
 
-
 
NC_009075  BURPS668_A2498  putative polyamine ABC transporter, permease protein  100 
 
 
289 aa  329  1e-89  Burkholderia pseudomallei 668  Bacteria  normal  0.633965  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2359  putative polyamine ABC transporter, permease protein  100 
 
 
289 aa  329  1e-89  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0812  polyamine ABC transporter, permease protein  100 
 
 
279 aa  308  2.9999999999999997e-83  Burkholderia pseudomallei 1710b  Bacteria  normal  0.610714  n/a   
 
 
-
 
NC_007650  BTH_II0645  polyamine ABC transporter, permease protein  98.06 
 
 
279 aa  304  4.0000000000000004e-82  Burkholderia thailandensis E264  Bacteria  normal  0.637437  n/a   
 
 
-
 
NC_007952  Bxe_B2930  spermidine/putrescine ABC transporter inner membrane protein  87.5 
 
 
279 aa  251  4.0000000000000004e-66  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6885  binding-protein-dependent transport systems inner membrane component  86.84 
 
 
279 aa  248  3e-65  Burkholderia phytofirmans PsJN  Bacteria  normal  0.471707  normal  0.190136 
 
 
-
 
NC_010623  Bphy_4324  binding-protein-dependent transport systems inner membrane component  84.21 
 
 
279 aa  244  4e-64  Burkholderia phymatum STM815  Bacteria  normal  normal  0.644272 
 
 
-
 
NC_010515  Bcenmc03_3606  binding-protein-dependent transport systems inner membrane component  92.76 
 
 
281 aa  234  6e-61  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3815  binding-protein-dependent transport systems inner membrane component  91.08 
 
 
281 aa  233  6e-61  Burkholderia ambifaria MC40-6  Bacteria  normal  0.723291  normal 
 
 
-
 
NC_008061  Bcen_4445  binding-protein-dependent transport systems inner membrane component  92.76 
 
 
281 aa  234  6e-61  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.140944  n/a   
 
 
-
 
NC_008543  Bcen2424_3921  binding-protein-dependent transport systems inner membrane component  92.76 
 
 
281 aa  234  6e-61  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2167  ABC spermidine/putrescine transporter, inner membrane subunit  92.76 
 
 
278 aa  233  8e-61  Burkholderia sp. 383  Bacteria  hitchhiker  0.00407242  normal 
 
 
-
 
NC_008391  Bamb_3299  binding-protein-dependent transport systems inner membrane component  92.76 
 
 
278 aa  233  9e-61  Burkholderia ambifaria AMMD  Bacteria  normal  0.735344  normal  0.669781 
 
 
-
 
NC_010087  Bmul_5431  binding-protein-dependent transport systems inner membrane component  92.76 
 
 
278 aa  233  1.0000000000000001e-60  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.708074  normal  0.0941502 
 
 
-
 
NC_010086  Bmul_4662  binding-protein-dependent transport systems inner membrane component  92.76 
 
 
278 aa  232  2.0000000000000002e-60  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.445054  normal 
 
 
-
 
NC_008391  Bamb_4294  binding-protein-dependent transport systems inner membrane component  66.67 
 
 
279 aa  199  1.9999999999999998e-50  Burkholderia ambifaria AMMD  Bacteria  normal  0.144254  normal 
 
 
-
 
NC_009439  Pmen_4000  binding-protein-dependent transport systems inner membrane component  62.59 
 
 
275 aa  194  4.0000000000000005e-49  Pseudomonas mendocina ymp  Bacteria  normal  0.360042  normal 
 
 
-
 
NC_002947  PP_0414  binding-protein-dependent transport systems inner membrane component  61.22 
 
 
275 aa  189  1e-47  Pseudomonas putida KT2440  Bacteria  normal  0.958357  normal 
 
 
-
 
NC_010322  PputGB1_0445  binding-protein-dependent transport systems inner membrane component  61.22 
 
 
275 aa  189  1e-47  Pseudomonas putida GB-1  Bacteria  normal  normal  0.355956 
 
 
-
 
NC_009512  Pput_0448  binding-protein-dependent transport systems inner membrane component  61.22 
 
 
275 aa  188  2.9999999999999997e-47  Pseudomonas putida F1  Bacteria  normal  normal  0.439073 
 
 
-
 
NC_003295  RSc1731  transmembrane ABC transporter protein  83.78 
 
 
272 aa  187  5.999999999999999e-47  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0271867  normal 
 
 
-
 
NC_007492  Pfl01_5122  binding-protein dependent transport system inner membrane protein  61.22 
 
 
274 aa  186  1e-46  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.026759  normal  0.638371 
 
 
-
 
NC_010622  Bphy_2380  binding-protein-dependent transport systems inner membrane component  61.9 
 
 
279 aa  182  2.0000000000000003e-45  Burkholderia phymatum STM815  Bacteria  normal  0.576146  normal 
 
 
-
 
NC_012856  Rpic12D_1521  binding-protein-dependent transport systems inner membrane component  86.18 
 
 
278 aa  181  3e-45  Ralstonia pickettii 12D  Bacteria  hitchhiker  0.00468579  normal  0.67881 
 
 
-
 
NC_010682  Rpic_1470  binding-protein-dependent transport systems inner membrane component  85.53 
 
 
278 aa  180  8.000000000000001e-45  Ralstonia pickettii 12J  Bacteria  normal  hitchhiker  0.0000000044635 
 
 
-
 
NC_011662  Tmz1t_0427  binding-protein-dependent transport systems inner membrane component  61.9 
 
 
274 aa  171  2.9999999999999996e-42  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2916  binding-protein-dependent transport systems inner membrane component  59.73 
 
 
274 aa  165  2.9999999999999998e-40  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0750  ABC transporter permease  61.22 
 
 
276 aa  160  6e-39  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_07900  putative permease of ABC transporter  61.22 
 
 
276 aa  160  6e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00280578 
 
 
-
 
NC_010501  PputW619_4788  binding-protein-dependent transport systems inner membrane component  60.54 
 
 
275 aa  160  9e-39  Pseudomonas putida W619  Bacteria  normal  normal  0.776443 
 
 
-
 
NC_012791  Vapar_4699  binding-protein-dependent transport systems inner membrane component  57.72 
 
 
272 aa  157  7e-38  Variovorax paradoxus S110  Bacteria  normal  0.607966  n/a   
 
 
-
 
NC_009708  YpsIP31758_1221  spermidine/putrescine ABC transporter, permease protein  53.64 
 
 
282 aa  157  7e-38  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3109  spermidine/putrescine ABC transporter permease  53.64 
 
 
282 aa  157  9e-38  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1338  binding-protein-dependent transport systems inner membrane component  53.64 
 
 
282 aa  157  9e-38  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1871  binding-protein-dependent transport systems inner membrane component  55.94 
 
 
278 aa  156  1e-37  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2228  binding-protein-dependent transport systems inner membrane component  60.98 
 
 
272 aa  155  2e-37  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2541  binding-protein-dependent transport systems inner membrane component  60.98 
 
 
272 aa  155  3e-37  Pectobacterium wasabiae WPP163  Bacteria  normal  0.180027  n/a   
 
 
-
 
NC_008786  Veis_4042  binding-protein-dependent transport systems inner membrane component  55.9 
 
 
278 aa  153  1e-36  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2045  binding-protein dependent transport system inner membrane protein  55 
 
 
275 aa  150  8e-36  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.586316  n/a   
 
 
-
 
NC_010681  Bphyt_2374  binding-protein-dependent transport systems inner membrane component  53.97 
 
 
270 aa  145  2.0000000000000003e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0565  polyamine ABC transporter, permease protein  63.64 
 
 
273 aa  140  9.999999999999999e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.903035  n/a   
 
 
-
 
NC_007005  Psyr_4612  binding-protein dependent transport system inner membrane protein  61.81 
 
 
273 aa  138  3.9999999999999997e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.950111 
 
 
-
 
NC_012880  Dd703_1788  binding-protein-dependent transport systems inner membrane component  57.8 
 
 
275 aa  134  8e-31  Dickeya dadantii Ech703  Bacteria  normal  0.0709875  n/a   
 
 
-
 
NC_010625  Bphy_6036  binding-protein-dependent transport systems inner membrane component  51.8 
 
 
280 aa  131  3e-30  Burkholderia phymatum STM815  Bacteria  normal  0.475506  normal  0.0258331 
 
 
-
 
NC_007908  Rfer_0596  binding-protein-dependent transport systems inner membrane component  60.4 
 
 
281 aa  129  1.0000000000000001e-29  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3472  ABC spermidine/putrescine transporter, innermembrane subunit  53.17 
 
 
275 aa  127  6e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.84629 
 
 
-
 
NC_009668  Oant_3714  binding-protein-dependent transport systems inner membrane component  49.61 
 
 
264 aa  126  1.0000000000000001e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.50413  n/a   
 
 
-
 
NC_013456  VEA_003666  probable permease of ABC transporter  43.4 
 
 
282 aa  125  3e-28  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2634  Fis family transcriptional regulator  56.77 
 
 
275 aa  125  4.0000000000000003e-28  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1718  binding-protein-dependent transport systems inner membrane component  49.22 
 
 
261 aa  124  9e-28  Sinorhizobium medicae WSM419  Bacteria  normal  0.367092  normal 
 
 
-
 
NC_009439  Pmen_4203  binding-protein-dependent transport systems inner membrane component  47.37 
 
 
284 aa  121  5e-27  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0329  spermidine/putrescine ABC transporter, permease protein  47.29 
 
 
258 aa  120  7e-27  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0303  spermidine/putrescine ABC transporter, permease protein  47.29 
 
 
242 aa  120  8e-27  Brucella ovis ATCC 25840  Bacteria  normal  0.102873  n/a   
 
 
-
 
NC_007493  RSP_1886  ABC polyamine/opine transporter, inner membrane subunit  38.2 
 
 
302 aa  118  3.9999999999999996e-26  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0261044  n/a   
 
 
-
 
NC_009049  Rsph17029_0533  binding-protein-dependent transport systems inner membrane component  38.2 
 
 
302 aa  118  3.9999999999999996e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011370  Rleg2_6319  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
311 aa  110  7.000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_2990  binding-protein-dependent transport systems inner membrane component  36.18 
 
 
391 aa  110  1.0000000000000001e-23  Ruegeria sp. TM1040  Bacteria  normal  0.0689786  normal  0.478679 
 
 
-
 
NC_008686  Pden_0469  binding-protein-dependent transport systems inner membrane component  40.85 
 
 
261 aa  107  6e-23  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010627  Bphy_7801  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
284 aa  105  2e-22  Burkholderia phymatum STM815  Bacteria  normal  0.109099  normal 
 
 
-
 
NC_011004  Rpal_5130  binding-protein-dependent transport systems inner membrane component  40.74 
 
 
596 aa  103  1e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2367  binding-protein-dependent transport systems inner membrane component  43.08 
 
 
597 aa  103  1e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4359  binding-protein-dependent transport systems inner membrane component  41.67 
 
 
591 aa  102  2e-21  Polaromonas sp. JS666  Bacteria  normal  0.184868  normal  0.311507 
 
 
-
 
NC_008686  Pden_2149  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
317 aa  102  2e-21  Paracoccus denitrificans PD1222  Bacteria  normal  0.964128  normal 
 
 
-
 
NC_008687  Pden_3462  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
317 aa  102  2e-21  Paracoccus denitrificans PD1222  Bacteria  normal  0.397103  normal 
 
 
-
 
NC_012854  Rleg_6542  binding-protein-dependent transport systems inner membrane component  37.31 
 
 
266 aa  102  2e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.208097 
 
 
-
 
NC_009428  Rsph17025_0669  binding-protein-dependent transport systems inner membrane component  38.76 
 
 
302 aa  100  8e-21  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.703183  decreased coverage  0.00406326 
 
 
-
 
NC_009621  Smed_6247  binding-protein-dependent transport systems inner membrane component  41.04 
 
 
266 aa  100  9e-21  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.487966 
 
 
-
 
NC_007802  Jann_1271  binding-protein-dependent transport systems inner membrane component  30.24 
 
 
337 aa  100  1e-20  Jannaschia sp. CCS1  Bacteria  normal  0.494716  normal  0.616088 
 
 
-
 
NC_008688  Pden_4602  binding-protein-dependent transport systems inner membrane component  44.04 
 
 
591 aa  99  3e-20  Paracoccus denitrificans PD1222  Bacteria  normal  0.621124  normal 
 
 
-
 
NC_011369  Rleg2_4105  binding-protein-dependent transport systems inner membrane component  45.79 
 
 
262 aa  97.4  8e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4995  binding-protein-dependent transport systems inner membrane component  45.45 
 
 
265 aa  97.4  9e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.887799  normal 
 
 
-
 
NC_011368  Rleg2_5591  binding-protein-dependent transport systems inner membrane component  38.81 
 
 
266 aa  95.5  3e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1611  spermidine/putrescine ABC transporter permease  42.31 
 
 
259 aa  95.1  4e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3449  binding-protein-dependent transport systems inner membrane component  41.67 
 
 
269 aa  94.7  5e-19  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.413551 
 
 
-
 
NC_010625  Bphy_6578  binding-protein-dependent transport systems inner membrane component  38.1 
 
 
265 aa  94.4  7e-19  Burkholderia phymatum STM815  Bacteria  normal  0.496226  normal  0.414836 
 
 
-
 
NC_013739  Cwoe_0569  binding-protein-dependent transport systems inner membrane component  38.57 
 
 
268 aa  94  1e-18  Conexibacter woesei DSM 14684  Bacteria  normal  0.0474626  normal 
 
 
-
 
NC_011988  Avi_6091  ABC transporter membrane spanning protein (polyamine)  39.66 
 
 
266 aa  92.8  2e-18  Agrobacterium vitis S4  Bacteria  normal  0.417915  n/a   
 
 
-
 
NC_010676  Bphyt_6153  binding-protein-dependent transport systems inner membrane component  38.1 
 
 
264 aa  92  3e-18  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3864  binding-protein-dependent transport systems inner membrane component  40.65 
 
 
261 aa  91.3  5e-18  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1933  binding-protein-dependent transport systems inner membrane component  40 
 
 
269 aa  90.9  7e-18  Pseudomonas putida W619  Bacteria  normal  normal  0.0161656 
 
 
-
 
NC_010322  PputGB1_2089  binding-protein-dependent transport systems inner membrane component  40.83 
 
 
268 aa  89.4  2e-17  Pseudomonas putida GB-1  Bacteria  normal  0.217099  normal 
 
 
-
 
NC_008254  Meso_1862  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
272 aa  89  3e-17  Chelativorans sp. BNC1  Bacteria  normal  0.148364  n/a   
 
 
-
 
NC_002947  PP_3816  binding-protein-dependent transport systems inner membrane component  40 
 
 
269 aa  88.6  4e-17  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.0037178  normal  0.4746 
 
 
-
 
NC_009512  Pput_1953  binding-protein-dependent transport systems inner membrane component  40 
 
 
268 aa  88.6  4e-17  Pseudomonas putida F1  Bacteria  normal  0.911704  normal 
 
 
-
 
NC_007952  Bxe_B1507  ABC spermidine/putrescine transporter, inner membrane subunit  36.92 
 
 
264 aa  88.6  4e-17  Burkholderia xenovorans LB400  Bacteria  normal  0.375803  normal  0.0420414 
 
 
-
 
NC_008254  Meso_2370  binding-protein-dependent transport systems inner membrane component  38.71 
 
 
274 aa  88.6  4e-17  Chelativorans sp. BNC1  Bacteria  normal  0.560014  n/a   
 
 
-
 
NC_009621  Smed_5471  binding-protein-dependent transport systems inner membrane component  36.31 
 
 
588 aa  87.8  7e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0865  binding-protein-dependent transport systems inner membrane component  35.43 
 
 
264 aa  87  9e-17  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3243  binding-protein dependent transport system inner membrane protein  38.02 
 
 
269 aa  87  1e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.796458 
 
 
-
 
NC_011894  Mnod_4262  binding-protein-dependent transport systems inner membrane component  42.14 
 
 
593 aa  85.9  2e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_1787  binding-protein-dependent transport systems inner membrane component  32.61 
 
 
669 aa  85.9  2e-16  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007005  Psyr_2399  binding-protein dependent transport system inner membrane protein  38.53 
 
 
271 aa  84.3  7e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.00651767  normal  0.388943 
 
 
-
 
NC_009485  BBta_7195  ABC transporter permease  33.56 
 
 
271 aa  84.3  7e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0448  binding-protein-dependent transport systems inner membrane component  42.75 
 
 
275 aa  83.6  0.000000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2665  spermidine/putrescine ABC transporter, permease protein, putative  37.04 
 
 
271 aa  82.4  0.000000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0357719  n/a   
 
 
-
 
NC_008786  Veis_4689  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
276 aa  82.8  0.000000000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.363302  normal 
 
 
-
 
NC_009620  Smed_3736  binding-protein-dependent transport systems inner membrane component  28.79 
 
 
276 aa  82.4  0.000000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.282406  normal 
 
 
-
 
NC_008688  Pden_4875  binding-protein-dependent transport systems inner membrane component  35.38 
 
 
587 aa  82.4  0.000000000000003  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.432532 
 
 
-
 
NC_008463  PA14_04230  putative permease of ABC transporter  38.73 
 
 
262 aa  81.6  0.000000000000005  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
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