| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0533 |
|---|
| Symbol | |
|---|
| ID | 4898020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 561476 |
|---|
| End bp | 562384 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640111118 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001042421 |
|---|
| Protein GI | 126461307 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTTC CCGTCTACGC CAGCCCGCTC GAGCGCCTCT GGTATTACAG CTACCGCGTC
CTCTGCGGGC TGATCTTCCT GTTCCTGATC GCGCCGATCC TGATCGTCAT CCCGCTCAGC
TTCAACGTCG AGCCCTACTT CACCTTCACC GAGAAGATGC TGTCGCTCGA TCCCGACGGC
TATTCGCTGC GCTGGTACGA CACGCTCCTG ACCTTCGGCA TGGCCAATCC CGAGGCTCCG
CGCGACTCCT CCTGGTGGAT GGATGTGTGG AACAACGCGG CCTGGGTGCG GGCGGCCAAG
AATTCGGTCA TCATCGGCGT CTCCTCGACG GTGGTCGCGA CCGTGCTCGG CACCGTGGCG
GCCCTCGGCC TCTCGCGCCC CGAGATGCCC TACCGGCGCG CGATCATGGC GATCCTGATC
TCGCCCATGA TCGTGCCGAT CATCATCACC GCCACGGGCC TCTTCTTCTT CTATTCCGCG
ACGGGTCTCG CGGGCAGCTA TGTGGGCGTG GTGCTGGCCC ACGCCACGCT GGGCATCCCC
TTTGTCATCA TCACCGTGAC CGCGACCCTC GTGGGCTTCG ACCGCTCGCT CACCCGGGCC
GCCGCCTCGC TCGGGGCCAG CCCCACCACA ACCTTCTTCA AGGTCACGAT GCCGCTCATC
CTGCCGGGCG TGATCTCCGG CGCCCTCTTC GCCTTCGTCA CCTCCTTCGA TGAGGTGGTG
GTCGTGCTCT TCGTTGCGGC CCACGACCAG CAGACGATCC CGCGCCAGAT GTGGAACGGC
ATCCGCGAGC AGATCAGCCC GGCGATTCTC TCGGTGGCCA CCATCCTCGT CATCGTGTCG
GTGCTCCTCC TTGCCACGGT CGAGCTGCTC CGCCGCCGCT CGGAGCGGCT CCGCGGCATC
TCCGGCTGA
|
|---|
| Protein sequence | MALPVYASPL ERLWYYSYRV LCGLIFLFLI APILIVIPLS FNVEPYFTFT EKMLSLDPDG
YSLRWYDTLL TFGMANPEAP RDSSWWMDVW NNAAWVRAAK NSVIIGVSST VVATVLGTVA
ALGLSRPEMP YRRAIMAILI SPMIVPIIIT ATGLFFFYSA TGLAGSYVGV VLAHATLGIP
FVIITVTATL VGFDRSLTRA AASLGASPTT TFFKVTMPLI LPGVISGALF AFVTSFDEVV
VVLFVAAHDQ QTIPRQMWNG IREQISPAIL SVATILVIVS VLLLATVELL RRRSERLRGI
SG
|
|---|
| |