Gene Bcenmc03_3606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3606 
Symbol 
ID6126440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp493527 
End bp494372 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID641650713 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001777248 
Protein GI170735988 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCA TGAAACTCGC CAGGCCGCTG TTCGCGCCGC ACATGTCGTT CGTCGAGCGC 
GCGTGGTACG TCGCGTTGCG CGTGCTCGTC GTGCTGACGC TGCTGTACCT GATCCTGCCG
GTGCTCGCGA TCGTGCCGCT GTCGTTCTCG TCGAGCACGT TCCTCGTGTA TCCGATTCCG
GGTTTCTCGC TGCGCTGGTA CGAGAACCTG ATCGCATCCG ACGAGTGGCG CATGGCCGCG
AAGAACAGCT TCATCGTCGC GCCGTCGGCG ACCGTCGTCG CGACCGTGCT CGGCACGCTC
GCGGCCATCG GCCTGACGAA AGCCGATTTC CGCGGCAAGG GGCTGCTGAT GGCCGTGCTG
CTGTCGCCGA TGATCGTGCC CGTCGTCGTG GTCGGCGTCG GCATGTACCT GTTCTTCGCG
CCGCTCGGGC TCGCGAATAC CTACACGGGG CTGATCGCCG CGCATGCGGC ACTCGGCGTG
CCGTTCGTCG TGACGACGGT GGCCGCGACG CTGCAGGGCT TCAACCAGAA CCTCGTACGG
GCAAGCCTGT CGCTCGGCGC GAACCCGGTC ACGACGTTCT TCCGCGTGAC GCTGCCGGTG
ATCGCGCCGG GCGTGATGTC GGGTGCTCTG TTCGCATTCG CGACGTCGTT CGACGAAGTG
GTCGTCACGC TGTTCCTCGC CGGCGCGGAC CAGACGACGC TGCCGCGCCA GATGTTCACG
GGCATCCGCG AGAACATCAG CCCGACGATC GCGGCGCTCG CCACGATCCT GATCATTTTC
TCGACGAGCC TGCTGCTCGC GCTCGAATGG CTGCGCGGCC GCAATGCGCG GCGTGCGGTG
ACCTGA
 
Protein sequence
MPTMKLARPL FAPHMSFVER AWYVALRVLV VLTLLYLILP VLAIVPLSFS SSTFLVYPIP 
GFSLRWYENL IASDEWRMAA KNSFIVAPSA TVVATVLGTL AAIGLTKADF RGKGLLMAVL
LSPMIVPVVV VGVGMYLFFA PLGLANTYTG LIAAHAALGV PFVVTTVAAT LQGFNQNLVR
ASLSLGANPV TTFFRVTLPV IAPGVMSGAL FAFATSFDEV VVTLFLAGAD QTTLPRQMFT
GIRENISPTI AALATILIIF STSLLLALEW LRGRNARRAV T