| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1470 |
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| Symbol | |
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| ID | 6289045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1562721 |
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| End bp | 1563557 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642625035 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001899041 |
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| Protein GI | 187928554 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000000044635 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTCA CCAAACCGAT GTTCGCCCCG CACACCTCGC TCATCGAGCG CATTTGGTAC
TTCGCGCTGC GCGGCCTGGC CGTGCTGACG CTGCTCTACC TTGTGCTGCC GGTGCTGGTG
ATCGTGCCGC TGTCGTTCTC GTCGAGCACG TTCCTCTCGT ACCCGATTCC GAGCTATTCG
CTGCGCTGGT ATCAGAACCT CGTCACGTCG GACGAATGGC GCATGGCCGC CAAGAACAGC
TTCATCGTCG CGCCTGCCGC CACGATCGTG GCAACGGTAC TGGGCACGCT GGCCGCCATC
GGGCTGAACA AGGCCGACTT CCGTGGCAAG GGCCTGCTGA TGGCGGTGCT GGTGTCGCCG
ATGATCGTGC CGGTGGTGGT CGTGGGCGTT GGCATGTATC TGTTCTTTGC CCCGCTGGGC
CTGGCGAATA CGTATATCGG GCTGATCCTC GCGCATGCGG CGCTGGGCGT GCCGTTTGTG
GTGACGACCG TGCTGGCGAC GCTGCAGGGC TTCAATCACA ACCTCGTGCG GGCAAGCCTT
TCGCTGGGTG CCAACCCGGT CGTGACGTTC TTCCGCATCA CCCTGCCCGT GATCGCACCG
GGCGTGATTT CCGGCGCGCT GTTTGCGTTT GCCACCTCAT TTGATGAGGT GGTGGTGACG
CTCTTCCTGG CGGGTGCCGA TCAGGTGACG CTGCCACGCC AGATGTTCAC AGGCATTCGC
GAGAACATTT CGCCGACGAT TGCGGCGCTG GCGACGATCT TGATTGTGTT TTCGACTTGC
CTGCTGCTGA CGTTTGAGTG GCTGCGGGGG CGGGCTGCGG CTAAGGCGGT GGCGTAA
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| Protein sequence | MKLTKPMFAP HTSLIERIWY FALRGLAVLT LLYLVLPVLV IVPLSFSSST FLSYPIPSYS
LRWYQNLVTS DEWRMAAKNS FIVAPAATIV ATVLGTLAAI GLNKADFRGK GLLMAVLVSP
MIVPVVVVGV GMYLFFAPLG LANTYIGLIL AHAALGVPFV VTTVLATLQG FNHNLVRASL
SLGANPVVTF FRITLPVIAP GVISGALFAF ATSFDEVVVT LFLAGADQVT LPRQMFTGIR
ENISPTIAAL ATILIVFSTC LLLTFEWLRG RAAAKAVA
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