| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1611 |
|---|
| Symbol | |
|---|
| ID | 5153607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1685252 |
|---|
| End bp | 1686031 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640556573 |
|---|
| Product | spermidine/putrescine ABC transporter permease |
|---|
| Protein accession | YP_001237731 |
|---|
| Protein GI | 148253146 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAC TGCCCATCCT CAAACTCGTG TTCGCGGCGC TCGTGATCCT GTTCCTGCTT
GGCCCGCTGA TCGCGGTGCT GCCGCTGTCG CTGACCGACA GCGTGTTCCT GAACTATCCA
ATCCCGGGCT ATTCGACGCG CTGGTTCCGC GAGCTGGTTA CCGCCGATTC CTGGCGGCTG
TCGATCGTCA ACAGCCTGCT GATCGGCGCC GGCACCACGA CGCTGGCCAC CCTGCTCGGC
ACGCTCGCCG CCCTCGGCCT GCGCGGCAGG CGGGCGTCGC TGGTGTTCTC CACACTACGT
ACCGTCTTCC TGCTGCCGAT GGTCGTCCCG GCCGTGGTGC TCGGCGTCGG AATGCAGCTG
ATGTTTTCGC GCTACGGGCT GACCAACACT TATCTCGGCG TCATCATCGC CCACACGGTC
GTGGCCGTGC CGTTCGTGCT GGTCAACGTC TCCTCGGCCC TGCAGGGCGT CGATGTCAGG
CTGGAACAAG CGGCGGCGAG CCTCGGCGCC GCGCCTGCGA CCGTGCTGTT CGCCGTGACC
CTGCCGATCG CCCTGCCCGG CATCATCTCG GGCGCGCTGT TCGCCTTCGC CACCTCGCTC
GACGAGGTGG TGCTGACGCT GTTCGTCGCC GGGCCCAATC AGCGTACGCT CGCGCGGCAA
ATGTTCGCCA CCATCCGCGA GAACATCAGC CCGGCGATCG TCTCGGCCGC GGCGGTGTTC
ATCGTCGGCA CGATCGTGCT GTCGCTCGCG ATGCTCGCGG TCCGGCGACG GCTGGCGTGA
|
|---|
| Protein sequence | MTPLPILKLV FAALVILFLL GPLIAVLPLS LTDSVFLNYP IPGYSTRWFR ELVTADSWRL
SIVNSLLIGA GTTTLATLLG TLAALGLRGR RASLVFSTLR TVFLLPMVVP AVVLGVGMQL
MFSRYGLTNT YLGVIIAHTV VAVPFVLVNV SSALQGVDVR LEQAAASLGA APATVLFAVT
LPIALPGIIS GALFAFATSL DEVVLTLFVA GPNQRTLARQ MFATIRENIS PAIVSAAAVF
IVGTIVLSLA MLAVRRRLA
|
|---|
| |